Protein–RNA interactions for Protein: A0A140LIR9

Gm4881, Predicted gene 4881, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4881A0A140LIR9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm4881A0A140LIR9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm4881A0A140LIR9 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.45■□□□□ 0.54
Gm4881A0A140LIR9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm4881A0A140LIR9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm4881A0A140LIR9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Gm5921-201ENSMUST00000075898 882 ntBASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm4881A0A140LIR9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm4881A0A140LIR9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm4881A0A140LIR9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm4881A0A140LIR9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm4881A0A140LIR9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm4881A0A140LIR9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm4881A0A140LIR9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm4881A0A140LIR9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm4881A0A140LIR9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms