Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.57■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14523-201ENSMUST00000117260 558 ntBASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11175-201ENSMUST00000116172 543 ntBASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.53■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7332-201ENSMUST00000118351 454 ntBASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav15d-2-dv6d-2A0A0G2JGQ7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms