Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9n-4A0A075B631 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav9n-4A0A075B631 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9n-4A0A075B631 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9n-4A0A075B631 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9n-4A0A075B631 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-4A0A075B631 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-4A0A075B631 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
Trav9n-4A0A075B631 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-4A0A075B631 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-4A0A075B631 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Trav9n-4A0A075B631 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9n-4A0A075B631 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9n-4A0A075B631 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9n-4A0A075B631 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Gm27502-201ENSMUST00000183495 199 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms