Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.47■□□□□ 0.87
PdfS4R2K0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.47■□□□□ 0.87
PdfS4R2K0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PdfS4R2K0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PdfS4R2K0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdfS4R2K0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PdfS4R2K0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdfS4R2K0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PdfS4R2K0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PdfS4R2K0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PdfS4R2K0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PdfS4R2K0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PdfS4R2K0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PdfS4R2K0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PdfS4R2K0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PdfS4R2K0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PdfS4R2K0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.31■□□□□ 0.84
PdfS4R2K0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PdfS4R2K0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PdfS4R2K0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.27■□□□□ 0.84
PdfS4R2K0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.26■□□□□ 0.83
PdfS4R2K0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PdfS4R2K0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PdfS4R2K0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdfS4R2K0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PdfS4R2K0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PdfS4R2K0 Gm27325-201ENSMUST00000175467 74 ntBASIC20.21■□□□□ 0.83
PdfS4R2K0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PdfS4R2K0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdfS4R2K0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.19■□□□□ 0.82
PdfS4R2K0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PdfS4R2K0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PdfS4R2K0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdfS4R2K0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PdfS4R2K0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PdfS4R2K0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PdfS4R2K0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PdfS4R2K0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PdfS4R2K0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PdfS4R2K0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PdfS4R2K0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PdfS4R2K0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PdfS4R2K0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PdfS4R2K0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.05■□□□□ 0.8
PdfS4R2K0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PdfS4R2K0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PdfS4R2K0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PdfS4R2K0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.96■□□□□ 0.79
PdfS4R2K0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PdfS4R2K0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PdfS4R2K0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
PdfS4R2K0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdfS4R2K0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdfS4R2K0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdfS4R2K0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdfS4R2K0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdfS4R2K0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdfS4R2K0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PdfS4R2K0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PdfS4R2K0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PdfS4R2K0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdfS4R2K0 Gm25262-201ENSMUST00000174934 133 ntBASIC19.82■□□□□ 0.76
PdfS4R2K0 Rab21-202ENSMUST00000218831 843 ntBASIC19.82■□□□□ 0.76
PdfS4R2K0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PdfS4R2K0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PdfS4R2K0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdfS4R2K0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PdfS4R2K0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PdfS4R2K0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.75■□□□□ 0.75
PdfS4R2K0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PdfS4R2K0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.74■□□□□ 0.75
PdfS4R2K0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PdfS4R2K0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PdfS4R2K0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PdfS4R2K0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.71■□□□□ 0.75
PdfS4R2K0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PdfS4R2K0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PdfS4R2K0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PdfS4R2K0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PdfS4R2K0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PdfS4R2K0 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.67■□□□□ 0.74
PdfS4R2K0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PdfS4R2K0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PdfS4R2K0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PdfS4R2K0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PdfS4R2K0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.64■□□□□ 0.73
PdfS4R2K0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PdfS4R2K0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PdfS4R2K0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PdfS4R2K0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PdfS4R2K0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.58■□□□□ 0.72
PdfS4R2K0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PdfS4R2K0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PdfS4R2K0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PdfS4R2K0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PdfS4R2K0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PdfS4R2K0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PdfS4R2K0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdfS4R2K0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PdfS4R2K0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms