Protein–RNA interactions for Protein: Q9DBA9

Gtf2h1, General transcription factor IIH subunit 1, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2h1Q9DBA9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Gtf2h1Q9DBA9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.7■■■□□ 2.35
Gtf2h1Q9DBA9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Gtf2h1Q9DBA9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.69■■■□□ 2.34
Gtf2h1Q9DBA9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Gtf2h1Q9DBA9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf2h1Q9DBA9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.61■■■□□ 2.33
Gtf2h1Q9DBA9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Gtf2h1Q9DBA9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Gtf2h1Q9DBA9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Gtf2h1Q9DBA9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Gtf2h1Q9DBA9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Gtf2h1Q9DBA9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Gtf2h1Q9DBA9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Gtf2h1Q9DBA9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Gtf2h1Q9DBA9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Gtf2h1Q9DBA9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.3■■■□□ 2.28
Gtf2h1Q9DBA9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.3■■■□□ 2.28
Gtf2h1Q9DBA9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.29■■■□□ 2.28
Gtf2h1Q9DBA9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Gtf2h1Q9DBA9 Gm25262-201ENSMUST00000174934 133 ntBASIC29.26■■■□□ 2.27
Gtf2h1Q9DBA9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gtf2h1Q9DBA9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Gtf2h1Q9DBA9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Gtf2h1Q9DBA9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gtf2h1Q9DBA9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gtf2h1Q9DBA9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Gtf2h1Q9DBA9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Gtf2h1Q9DBA9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gtf2h1Q9DBA9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.18■■■□□ 2.26
Gtf2h1Q9DBA9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gtf2h1Q9DBA9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gtf2h1Q9DBA9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Gtf2h1Q9DBA9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Gtf2h1Q9DBA9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
Gtf2h1Q9DBA9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Gtf2h1Q9DBA9 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.08■■■□□ 2.25
Gtf2h1Q9DBA9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gtf2h1Q9DBA9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
Gtf2h1Q9DBA9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Gtf2h1Q9DBA9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Gtf2h1Q9DBA9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gtf2h1Q9DBA9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gtf2h1Q9DBA9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.86■■■□□ 2.21
Gtf2h1Q9DBA9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Gtf2h1Q9DBA9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.77■■■□□ 2.2
Gtf2h1Q9DBA9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Gtf2h1Q9DBA9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Gtf2h1Q9DBA9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.74■■■□□ 2.19
Gtf2h1Q9DBA9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Gtf2h1Q9DBA9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Gtf2h1Q9DBA9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Gtf2h1Q9DBA9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Gtf2h1Q9DBA9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Gtf2h1Q9DBA9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Gtf2h1Q9DBA9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Gtf2h1Q9DBA9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Gtf2h1Q9DBA9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Gtf2h1Q9DBA9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Gtf2h1Q9DBA9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Gtf2h1Q9DBA9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Gtf2h1Q9DBA9 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.6■■■□□ 2.17
Gtf2h1Q9DBA9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Gtf2h1Q9DBA9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Gtf2h1Q9DBA9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.55■■■□□ 2.16
Gtf2h1Q9DBA9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Gtf2h1Q9DBA9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Gtf2h1Q9DBA9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Gtf2h1Q9DBA9 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.49■■■□□ 2.15
Gtf2h1Q9DBA9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Gtf2h1Q9DBA9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
Gtf2h1Q9DBA9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Gtf2h1Q9DBA9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gtf2h1Q9DBA9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Gtf2h1Q9DBA9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Gtf2h1Q9DBA9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.4■■■□□ 2.14
Gtf2h1Q9DBA9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.4■■■□□ 2.14
Gtf2h1Q9DBA9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Gtf2h1Q9DBA9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Gtf2h1Q9DBA9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Gtf2h1Q9DBA9 Gm27322-201ENSMUST00000184007 104 ntBASIC28.37■■■□□ 2.13
Gtf2h1Q9DBA9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
Gtf2h1Q9DBA9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Gtf2h1Q9DBA9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
Gtf2h1Q9DBA9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Gtf2h1Q9DBA9 Mipep-204ENSMUST00000225043 1548 ntBASIC28.33■■■□□ 2.13
Gtf2h1Q9DBA9 Gm26115-201ENSMUST00000175605 87 ntBASIC28.29■■■□□ 2.12
Gtf2h1Q9DBA9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Gtf2h1Q9DBA9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Gtf2h1Q9DBA9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.27■■■□□ 2.12
Gtf2h1Q9DBA9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gtf2h1Q9DBA9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Gtf2h1Q9DBA9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Gtf2h1Q9DBA9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Gtf2h1Q9DBA9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Gtf2h1Q9DBA9 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.21■■■□□ 2.11
Gtf2h1Q9DBA9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.2■■■□□ 2.1
Gtf2h1Q9DBA9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Gtf2h1Q9DBA9 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.19■■■□□ 2.1
Gtf2h1Q9DBA9 Gm8109-201ENSMUST00000194076 746 ntBASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms