Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ssbp2Q9CYZ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ssbp2Q9CYZ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ssbp2Q9CYZ8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ssbp2Q9CYZ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.02■■□□□ 1.12
Ssbp2Q9CYZ8 Rab21-202ENSMUST00000218831 843 ntBASIC22■■□□□ 1.11
Ssbp2Q9CYZ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ssbp2Q9CYZ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.99■■□□□ 1.11
Ssbp2Q9CYZ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Ssbp2Q9CYZ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ssbp2Q9CYZ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssbp2Q9CYZ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ssbp2Q9CYZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ssbp2Q9CYZ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ssbp2Q9CYZ8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ssbp2Q9CYZ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.86■■□□□ 1.09
Ssbp2Q9CYZ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ssbp2Q9CYZ8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssbp2Q9CYZ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssbp2Q9CYZ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.78■■□□□ 1.08
Ssbp2Q9CYZ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ssbp2Q9CYZ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.7■■□□□ 1.06
Ssbp2Q9CYZ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ssbp2Q9CYZ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ssbp2Q9CYZ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ssbp2Q9CYZ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ssbp2Q9CYZ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ssbp2Q9CYZ8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssbp2Q9CYZ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.62■■□□□ 1.05
Ssbp2Q9CYZ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ssbp2Q9CYZ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ssbp2Q9CYZ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.61■■□□□ 1.05
Ssbp2Q9CYZ8 Gm25262-201ENSMUST00000174934 133 ntBASIC21.61■■□□□ 1.05
Ssbp2Q9CYZ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssbp2Q9CYZ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ssbp2Q9CYZ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssbp2Q9CYZ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssbp2Q9CYZ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssbp2Q9CYZ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssbp2Q9CYZ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssbp2Q9CYZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.56■■□□□ 1.04
Ssbp2Q9CYZ8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssbp2Q9CYZ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ssbp2Q9CYZ8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ssbp2Q9CYZ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ssbp2Q9CYZ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ssbp2Q9CYZ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ssbp2Q9CYZ8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ssbp2Q9CYZ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.42■■□□□ 1.02
Ssbp2Q9CYZ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssbp2Q9CYZ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssbp2Q9CYZ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssbp2Q9CYZ8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssbp2Q9CYZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.35■■□□□ 1.01
Ssbp2Q9CYZ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Ssbp2Q9CYZ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssbp2Q9CYZ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssbp2Q9CYZ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssbp2Q9CYZ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ssbp2Q9CYZ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ssbp2Q9CYZ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ssbp2Q9CYZ8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ssbp2Q9CYZ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ssbp2Q9CYZ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.23■□□□□ 0.99
Ssbp2Q9CYZ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ssbp2Q9CYZ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ssbp2Q9CYZ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.22■□□□□ 0.99
Ssbp2Q9CYZ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ssbp2Q9CYZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ssbp2Q9CYZ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.17■□□□□ 0.98
Ssbp2Q9CYZ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssbp2Q9CYZ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.15■□□□□ 0.98
Ssbp2Q9CYZ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ssbp2Q9CYZ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssbp2Q9CYZ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssbp2Q9CYZ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssbp2Q9CYZ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssbp2Q9CYZ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.11■□□□□ 0.97
Ssbp2Q9CYZ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.1■□□□□ 0.97
Ssbp2Q9CYZ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssbp2Q9CYZ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssbp2Q9CYZ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ssbp2Q9CYZ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ssbp2Q9CYZ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ssbp2Q9CYZ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssbp2Q9CYZ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssbp2Q9CYZ8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.97■□□□□ 0.95
Ssbp2Q9CYZ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Ssbp2Q9CYZ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
Ssbp2Q9CYZ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.95■□□□□ 0.95
Ssbp2Q9CYZ8 Mipep-204ENSMUST00000225043 1548 ntBASIC20.95■□□□□ 0.94
Ssbp2Q9CYZ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ssbp2Q9CYZ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssbp2Q9CYZ8 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.95■□□□□ 0.94
Ssbp2Q9CYZ8 Gm27322-201ENSMUST00000184007 104 ntBASIC20.94■□□□□ 0.94
Ssbp2Q9CYZ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.94■□□□□ 0.94
Ssbp2Q9CYZ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ssbp2Q9CYZ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssbp2Q9CYZ8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssbp2Q9CYZ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms