Protein–RNA interactions for Protein: Q9CXX9

Cuedc2, CUE domain-containing protein 2, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc2Q9CXX9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.83■■■□□ 2.21
Cuedc2Q9CXX9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.83■■■□□ 2.21
Cuedc2Q9CXX9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cuedc2Q9CXX9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cuedc2Q9CXX9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cuedc2Q9CXX9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Cuedc2Q9CXX9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.72■■■□□ 2.19
Cuedc2Q9CXX9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Cuedc2Q9CXX9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Cuedc2Q9CXX9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cuedc2Q9CXX9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cuedc2Q9CXX9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.63■■■□□ 2.17
Cuedc2Q9CXX9 Rab21-202ENSMUST00000218831 843 ntBASIC28.57■■■□□ 2.16
Cuedc2Q9CXX9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cuedc2Q9CXX9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cuedc2Q9CXX9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cuedc2Q9CXX9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.41■■■□□ 2.14
Cuedc2Q9CXX9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
Cuedc2Q9CXX9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cuedc2Q9CXX9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cuedc2Q9CXX9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Cuedc2Q9CXX9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Cuedc2Q9CXX9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cuedc2Q9CXX9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.31■■■□□ 2.12
Cuedc2Q9CXX9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cuedc2Q9CXX9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.3■■■□□ 2.12
Cuedc2Q9CXX9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Cuedc2Q9CXX9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.27■■■□□ 2.12
Cuedc2Q9CXX9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cuedc2Q9CXX9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cuedc2Q9CXX9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cuedc2Q9CXX9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cuedc2Q9CXX9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cuedc2Q9CXX9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cuedc2Q9CXX9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cuedc2Q9CXX9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.18■■■□□ 2.1
Cuedc2Q9CXX9 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.17■■■□□ 2.1
Cuedc2Q9CXX9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cuedc2Q9CXX9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cuedc2Q9CXX9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cuedc2Q9CXX9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cuedc2Q9CXX9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.15■■■□□ 2.1
Cuedc2Q9CXX9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Cuedc2Q9CXX9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cuedc2Q9CXX9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Cuedc2Q9CXX9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cuedc2Q9CXX9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cuedc2Q9CXX9 Gm25262-201ENSMUST00000174934 133 ntBASIC28.05■■■□□ 2.08
Cuedc2Q9CXX9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Cuedc2Q9CXX9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cuedc2Q9CXX9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cuedc2Q9CXX9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Cuedc2Q9CXX9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Cuedc2Q9CXX9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Cuedc2Q9CXX9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.88■■■□□ 2.05
Cuedc2Q9CXX9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Cuedc2Q9CXX9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Cuedc2Q9CXX9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Cuedc2Q9CXX9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Cuedc2Q9CXX9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Cuedc2Q9CXX9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Cuedc2Q9CXX9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
Cuedc2Q9CXX9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Cuedc2Q9CXX9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cuedc2Q9CXX9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Cuedc2Q9CXX9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cuedc2Q9CXX9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Cuedc2Q9CXX9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Cuedc2Q9CXX9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cuedc2Q9CXX9 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.62■■■□□ 2.01
Cuedc2Q9CXX9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cuedc2Q9CXX9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Cuedc2Q9CXX9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cuedc2Q9CXX9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Cuedc2Q9CXX9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Cuedc2Q9CXX9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Cuedc2Q9CXX9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.55■■■□□ 2
Cuedc2Q9CXX9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.53■■■□□ 2
Cuedc2Q9CXX9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.53■■■□□ 2
Cuedc2Q9CXX9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cuedc2Q9CXX9 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.51■■■□□ 2
Cuedc2Q9CXX9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cuedc2Q9CXX9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Cuedc2Q9CXX9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.45■■□□□ 1.98
Cuedc2Q9CXX9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Cuedc2Q9CXX9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.43■■□□□ 1.98
Cuedc2Q9CXX9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.42■■□□□ 1.98
Cuedc2Q9CXX9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.41■■□□□ 1.98
Cuedc2Q9CXX9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Cuedc2Q9CXX9 Mipep-204ENSMUST00000225043 1548 ntBASIC27.39■■□□□ 1.98
Cuedc2Q9CXX9 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.37■■□□□ 1.97
Cuedc2Q9CXX9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cuedc2Q9CXX9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cuedc2Q9CXX9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cuedc2Q9CXX9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cuedc2Q9CXX9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Cuedc2Q9CXX9 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.3■■□□□ 1.96
Cuedc2Q9CXX9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cuedc2Q9CXX9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
Cuedc2Q9CXX9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms