Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.43■■■□□ 2.78
Smc3Q9CW03 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.4■■■□□ 2.78
Smc3Q9CW03 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Smc3Q9CW03 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Smc3Q9CW03 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Smc3Q9CW03 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.26■■■□□ 2.75
Smc3Q9CW03 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Smc3Q9CW03 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Smc3Q9CW03 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Smc3Q9CW03 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Smc3Q9CW03 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Smc3Q9CW03 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
Smc3Q9CW03 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Smc3Q9CW03 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Smc3Q9CW03 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Smc3Q9CW03 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.94■■■□□ 2.7
Smc3Q9CW03 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.93■■■□□ 2.7
Smc3Q9CW03 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Smc3Q9CW03 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.92■■■□□ 2.7
Smc3Q9CW03 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smc3Q9CW03 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Smc3Q9CW03 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.84■■■□□ 2.69
Smc3Q9CW03 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Smc3Q9CW03 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.76■■■□□ 2.67
Smc3Q9CW03 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Smc3Q9CW03 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Smc3Q9CW03 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Smc3Q9CW03 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.67■■■□□ 2.66
Smc3Q9CW03 Rab21-202ENSMUST00000218831 843 ntBASIC31.66■■■□□ 2.66
Smc3Q9CW03 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Smc3Q9CW03 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Smc3Q9CW03 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
Smc3Q9CW03 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Smc3Q9CW03 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Smc3Q9CW03 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Smc3Q9CW03 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smc3Q9CW03 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
Smc3Q9CW03 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Smc3Q9CW03 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Smc3Q9CW03 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Smc3Q9CW03 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smc3Q9CW03 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.46■■■□□ 2.63
Smc3Q9CW03 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.44■■■□□ 2.62
Smc3Q9CW03 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Smc3Q9CW03 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.42■■■□□ 2.62
Smc3Q9CW03 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Smc3Q9CW03 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Smc3Q9CW03 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Smc3Q9CW03 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Smc3Q9CW03 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.34■■■□□ 2.61
Smc3Q9CW03 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Smc3Q9CW03 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Smc3Q9CW03 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Smc3Q9CW03 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Smc3Q9CW03 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smc3Q9CW03 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Smc3Q9CW03 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Smc3Q9CW03 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Smc3Q9CW03 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Smc3Q9CW03 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Smc3Q9CW03 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Smc3Q9CW03 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.23■■■□□ 2.59
Smc3Q9CW03 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.23■■■□□ 2.59
Smc3Q9CW03 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Smc3Q9CW03 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Smc3Q9CW03 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Smc3Q9CW03 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Smc3Q9CW03 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Smc3Q9CW03 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Smc3Q9CW03 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Smc3Q9CW03 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.09■■■□□ 2.57
Smc3Q9CW03 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Smc3Q9CW03 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Smc3Q9CW03 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Smc3Q9CW03 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.02■■■□□ 2.56
Smc3Q9CW03 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31■■■□□ 2.55
Smc3Q9CW03 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Smc3Q9CW03 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.98■■■□□ 2.55
Smc3Q9CW03 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
Smc3Q9CW03 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Smc3Q9CW03 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Smc3Q9CW03 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Smc3Q9CW03 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Smc3Q9CW03 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.84■■■□□ 2.53
Smc3Q9CW03 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.83■■■□□ 2.53
Smc3Q9CW03 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Smc3Q9CW03 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Smc3Q9CW03 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.81■■■□□ 2.52
Smc3Q9CW03 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Smc3Q9CW03 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smc3Q9CW03 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Smc3Q9CW03 Gm25262-201ENSMUST00000174934 133 ntBASIC30.79■■■□□ 2.52
Smc3Q9CW03 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Smc3Q9CW03 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Smc3Q9CW03 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Smc3Q9CW03 Mipep-204ENSMUST00000225043 1548 ntBASIC30.73■■■□□ 2.51
Smc3Q9CW03 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Smc3Q9CW03 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Smc3Q9CW03 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Smc3Q9CW03 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms