Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf2Q9CQJ4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf2Q9CQJ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.65■■□□□ 1.06
Rnf2Q9CQJ4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Rnf2Q9CQJ4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf2Q9CQJ4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf2Q9CQJ4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.58■■□□□ 1.05
Rnf2Q9CQJ4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf2Q9CQJ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Rnf2Q9CQJ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf2Q9CQJ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf2Q9CQJ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rnf2Q9CQJ4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf2Q9CQJ4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf2Q9CQJ4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf2Q9CQJ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf2Q9CQJ4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf2Q9CQJ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf2Q9CQJ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rnf2Q9CQJ4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf2Q9CQJ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf2Q9CQJ4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf2Q9CQJ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.35■■□□□ 1.01
Rnf2Q9CQJ4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf2Q9CQJ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf2Q9CQJ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf2Q9CQJ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf2Q9CQJ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.32■■□□□ 1
Rnf2Q9CQJ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf2Q9CQJ4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.28■■□□□ 1
Rnf2Q9CQJ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf2Q9CQJ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf2Q9CQJ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf2Q9CQJ4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf2Q9CQJ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf2Q9CQJ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.2■□□□□ 0.99
Rnf2Q9CQJ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.2■□□□□ 0.98
Rnf2Q9CQJ4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf2Q9CQJ4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf2Q9CQJ4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf2Q9CQJ4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf2Q9CQJ4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.14■□□□□ 0.98
Rnf2Q9CQJ4 Rab21-202ENSMUST00000218831 843 ntBASIC21.13■□□□□ 0.97
Rnf2Q9CQJ4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf2Q9CQJ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rnf2Q9CQJ4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rnf2Q9CQJ4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf2Q9CQJ4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf2Q9CQJ4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf2Q9CQJ4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf2Q9CQJ4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21■□□□□ 0.95
Rnf2Q9CQJ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf2Q9CQJ4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf2Q9CQJ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf2Q9CQJ4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf2Q9CQJ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf2Q9CQJ4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf2Q9CQJ4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rnf2Q9CQJ4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf2Q9CQJ4 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.9■□□□□ 0.94
Rnf2Q9CQJ4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf2Q9CQJ4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf2Q9CQJ4 Gm25262-201ENSMUST00000174934 133 ntBASIC20.86■□□□□ 0.93
Rnf2Q9CQJ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rnf2Q9CQJ4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf2Q9CQJ4 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.82■□□□□ 0.92
Rnf2Q9CQJ4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf2Q9CQJ4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf2Q9CQJ4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.79■□□□□ 0.92
Rnf2Q9CQJ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf2Q9CQJ4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf2Q9CQJ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.78■□□□□ 0.92
Rnf2Q9CQJ4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf2Q9CQJ4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
Rnf2Q9CQJ4 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.77■□□□□ 0.92
Rnf2Q9CQJ4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf2Q9CQJ4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf2Q9CQJ4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf2Q9CQJ4 Zxda-201ENSMUST00000117281 2621 ntBASIC20.74■□□□□ 0.91
Rnf2Q9CQJ4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf2Q9CQJ4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf2Q9CQJ4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf2Q9CQJ4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rnf2Q9CQJ4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf2Q9CQJ4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf2Q9CQJ4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf2Q9CQJ4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf2Q9CQJ4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf2Q9CQJ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf2Q9CQJ4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Rnf2Q9CQJ4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf2Q9CQJ4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.62■□□□□ 0.89
Rnf2Q9CQJ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf2Q9CQJ4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf2Q9CQJ4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf2Q9CQJ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf2Q9CQJ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf2Q9CQJ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf2Q9CQJ4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf2Q9CQJ4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms