Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
Vrk3Q8K3G5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vrk3Q8K3G5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vrk3Q8K3G5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.11■■□□□ 1.29
Vrk3Q8K3G5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vrk3Q8K3G5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vrk3Q8K3G5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vrk3Q8K3G5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.06■■□□□ 1.28
Vrk3Q8K3G5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vrk3Q8K3G5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.02■■□□□ 1.28
Vrk3Q8K3G5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vrk3Q8K3G5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vrk3Q8K3G5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vrk3Q8K3G5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.91■■□□□ 1.26
Vrk3Q8K3G5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vrk3Q8K3G5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vrk3Q8K3G5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.84■■□□□ 1.25
Vrk3Q8K3G5 Rab21-202ENSMUST00000218831 843 ntBASIC22.79■■□□□ 1.24
Vrk3Q8K3G5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vrk3Q8K3G5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk3Q8K3G5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Vrk3Q8K3G5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vrk3Q8K3G5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vrk3Q8K3G5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vrk3Q8K3G5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.69■■□□□ 1.22
Vrk3Q8K3G5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vrk3Q8K3G5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Vrk3Q8K3G5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.67■■□□□ 1.22
Vrk3Q8K3G5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk3Q8K3G5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vrk3Q8K3G5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vrk3Q8K3G5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vrk3Q8K3G5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Vrk3Q8K3G5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vrk3Q8K3G5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.58■■□□□ 1.21
Vrk3Q8K3G5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
Vrk3Q8K3G5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.58■■□□□ 1.2
Vrk3Q8K3G5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vrk3Q8K3G5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vrk3Q8K3G5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.56■■□□□ 1.2
Vrk3Q8K3G5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vrk3Q8K3G5 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.55■■□□□ 1.2
Vrk3Q8K3G5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vrk3Q8K3G5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vrk3Q8K3G5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk3Q8K3G5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.49■■□□□ 1.19
Vrk3Q8K3G5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vrk3Q8K3G5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vrk3Q8K3G5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vrk3Q8K3G5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Vrk3Q8K3G5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vrk3Q8K3G5 Gm25262-201ENSMUST00000174934 133 ntBASIC22.44■■□□□ 1.18
Vrk3Q8K3G5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vrk3Q8K3G5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Vrk3Q8K3G5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Vrk3Q8K3G5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vrk3Q8K3G5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vrk3Q8K3G5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vrk3Q8K3G5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Vrk3Q8K3G5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vrk3Q8K3G5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vrk3Q8K3G5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Vrk3Q8K3G5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vrk3Q8K3G5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.3■■□□□ 1.16
Vrk3Q8K3G5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vrk3Q8K3G5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vrk3Q8K3G5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vrk3Q8K3G5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vrk3Q8K3G5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vrk3Q8K3G5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vrk3Q8K3G5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vrk3Q8K3G5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vrk3Q8K3G5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk3Q8K3G5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk3Q8K3G5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.14■■□□□ 1.13
Vrk3Q8K3G5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vrk3Q8K3G5 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.13■■□□□ 1.13
Vrk3Q8K3G5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Vrk3Q8K3G5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vrk3Q8K3G5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Vrk3Q8K3G5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Vrk3Q8K3G5 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.06■■□□□ 1.12
Vrk3Q8K3G5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vrk3Q8K3G5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Vrk3Q8K3G5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.01■■□□□ 1.11
Vrk3Q8K3G5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Vrk3Q8K3G5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vrk3Q8K3G5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.97■■□□□ 1.11
Vrk3Q8K3G5 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.95■■□□□ 1.1
Vrk3Q8K3G5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk3Q8K3G5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.94■■□□□ 1.1
Vrk3Q8K3G5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vrk3Q8K3G5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.93■■□□□ 1.1
Vrk3Q8K3G5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vrk3Q8K3G5 Mipep-204ENSMUST00000225043 1548 ntBASIC21.91■■□□□ 1.1
Vrk3Q8K3G5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vrk3Q8K3G5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.89■■□□□ 1.09
Vrk3Q8K3G5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Vrk3Q8K3G5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vrk3Q8K3G5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms