Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smim4Q8C1Q6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Smim4Q8C1Q6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.89■■□□□ 1.25
Smim4Q8C1Q6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.86■■□□□ 1.25
Smim4Q8C1Q6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smim4Q8C1Q6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smim4Q8C1Q6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smim4Q8C1Q6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
Smim4Q8C1Q6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smim4Q8C1Q6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Smim4Q8C1Q6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.69■■□□□ 1.22
Smim4Q8C1Q6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Smim4Q8C1Q6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smim4Q8C1Q6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smim4Q8C1Q6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Smim4Q8C1Q6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.59■■□□□ 1.21
Smim4Q8C1Q6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.59■■□□□ 1.21
Smim4Q8C1Q6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smim4Q8C1Q6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Smim4Q8C1Q6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.57■■□□□ 1.2
Smim4Q8C1Q6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smim4Q8C1Q6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smim4Q8C1Q6 Rab21-202ENSMUST00000218831 843 ntBASIC22.5■■□□□ 1.19
Smim4Q8C1Q6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smim4Q8C1Q6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smim4Q8C1Q6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smim4Q8C1Q6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Smim4Q8C1Q6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smim4Q8C1Q6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.43■■□□□ 1.18
Smim4Q8C1Q6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smim4Q8C1Q6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smim4Q8C1Q6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smim4Q8C1Q6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Smim4Q8C1Q6 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.38■■□□□ 1.17
Smim4Q8C1Q6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.34■■□□□ 1.17
Smim4Q8C1Q6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Smim4Q8C1Q6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smim4Q8C1Q6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.32■■□□□ 1.16
Smim4Q8C1Q6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smim4Q8C1Q6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smim4Q8C1Q6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smim4Q8C1Q6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smim4Q8C1Q6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smim4Q8C1Q6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
Smim4Q8C1Q6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Smim4Q8C1Q6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Smim4Q8C1Q6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Smim4Q8C1Q6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Smim4Q8C1Q6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Smim4Q8C1Q6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Smim4Q8C1Q6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.2■■□□□ 1.14
Smim4Q8C1Q6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Smim4Q8C1Q6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Smim4Q8C1Q6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smim4Q8C1Q6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Smim4Q8C1Q6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Smim4Q8C1Q6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smim4Q8C1Q6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Smim4Q8C1Q6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smim4Q8C1Q6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smim4Q8C1Q6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smim4Q8C1Q6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Smim4Q8C1Q6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smim4Q8C1Q6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smim4Q8C1Q6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.06■■□□□ 1.12
Smim4Q8C1Q6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Smim4Q8C1Q6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smim4Q8C1Q6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Smim4Q8C1Q6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Smim4Q8C1Q6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Smim4Q8C1Q6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Smim4Q8C1Q6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Smim4Q8C1Q6 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.01■■□□□ 1.11
Smim4Q8C1Q6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Smim4Q8C1Q6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smim4Q8C1Q6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.9■■□□□ 1.1
Smim4Q8C1Q6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smim4Q8C1Q6 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.89■■□□□ 1.09
Smim4Q8C1Q6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smim4Q8C1Q6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Smim4Q8C1Q6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smim4Q8C1Q6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Smim4Q8C1Q6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.86■■□□□ 1.09
Smim4Q8C1Q6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smim4Q8C1Q6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smim4Q8C1Q6 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.84■■□□□ 1.09
Smim4Q8C1Q6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smim4Q8C1Q6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Smim4Q8C1Q6 Mipep-204ENSMUST00000225043 1548 ntBASIC21.76■■□□□ 1.07
Smim4Q8C1Q6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smim4Q8C1Q6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smim4Q8C1Q6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.74■■□□□ 1.07
Smim4Q8C1Q6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smim4Q8C1Q6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim4Q8C1Q6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Smim4Q8C1Q6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smim4Q8C1Q6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smim4Q8C1Q6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smim4Q8C1Q6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smim4Q8C1Q6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms