Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cpsf4Q8BQZ5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cpsf4Q8BQZ5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.44■■□□□ 1.82
Cpsf4Q8BQZ5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cpsf4Q8BQZ5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cpsf4Q8BQZ5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cpsf4Q8BQZ5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cpsf4Q8BQZ5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cpsf4Q8BQZ5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Cpsf4Q8BQZ5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf4Q8BQZ5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf4Q8BQZ5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.33■■□□□ 1.81
Cpsf4Q8BQZ5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpsf4Q8BQZ5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf4Q8BQZ5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Cpsf4Q8BQZ5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf4Q8BQZ5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf4Q8BQZ5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf4Q8BQZ5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cpsf4Q8BQZ5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cpsf4Q8BQZ5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Cpsf4Q8BQZ5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cpsf4Q8BQZ5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cpsf4Q8BQZ5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cpsf4Q8BQZ5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.16■■□□□ 1.78
Cpsf4Q8BQZ5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.15■■□□□ 1.78
Cpsf4Q8BQZ5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cpsf4Q8BQZ5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cpsf4Q8BQZ5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cpsf4Q8BQZ5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.09■■□□□ 1.77
Cpsf4Q8BQZ5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.08■■□□□ 1.77
Cpsf4Q8BQZ5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cpsf4Q8BQZ5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.03■■□□□ 1.76
Cpsf4Q8BQZ5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Cpsf4Q8BQZ5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Cpsf4Q8BQZ5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Cpsf4Q8BQZ5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Cpsf4Q8BQZ5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.91■■□□□ 1.74
Cpsf4Q8BQZ5 Gm26115-201ENSMUST00000175605 87 ntBASIC25.9■■□□□ 1.74
Cpsf4Q8BQZ5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cpsf4Q8BQZ5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cpsf4Q8BQZ5 Gm8109-201ENSMUST00000194076 746 ntBASIC25.84■■□□□ 1.73
Cpsf4Q8BQZ5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Cpsf4Q8BQZ5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cpsf4Q8BQZ5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf4Q8BQZ5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cpsf4Q8BQZ5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cpsf4Q8BQZ5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cpsf4Q8BQZ5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Cpsf4Q8BQZ5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.75■■□□□ 1.71
Cpsf4Q8BQZ5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cpsf4Q8BQZ5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cpsf4Q8BQZ5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Cpsf4Q8BQZ5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.73■■□□□ 1.71
Cpsf4Q8BQZ5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cpsf4Q8BQZ5 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.69■■□□□ 1.7
Cpsf4Q8BQZ5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cpsf4Q8BQZ5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cpsf4Q8BQZ5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cpsf4Q8BQZ5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
Cpsf4Q8BQZ5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.61■■□□□ 1.69
Cpsf4Q8BQZ5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cpsf4Q8BQZ5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf4Q8BQZ5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cpsf4Q8BQZ5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf4Q8BQZ5 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.54■■□□□ 1.68
Cpsf4Q8BQZ5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf4Q8BQZ5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Cpsf4Q8BQZ5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Cpsf4Q8BQZ5 Gm27322-201ENSMUST00000184007 104 ntBASIC25.49■■□□□ 1.67
Cpsf4Q8BQZ5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
Cpsf4Q8BQZ5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Cpsf4Q8BQZ5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cpsf4Q8BQZ5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cpsf4Q8BQZ5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Cpsf4Q8BQZ5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cpsf4Q8BQZ5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Cpsf4Q8BQZ5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cpsf4Q8BQZ5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Cpsf4Q8BQZ5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cpsf4Q8BQZ5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cpsf4Q8BQZ5 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.34■■□□□ 1.65
Cpsf4Q8BQZ5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cpsf4Q8BQZ5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.33■■□□□ 1.65
Cpsf4Q8BQZ5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cpsf4Q8BQZ5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Cpsf4Q8BQZ5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf4Q8BQZ5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cpsf4Q8BQZ5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cpsf4Q8BQZ5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cpsf4Q8BQZ5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.19■■□□□ 1.62
Cpsf4Q8BQZ5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf4Q8BQZ5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf4Q8BQZ5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cpsf4Q8BQZ5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cpsf4Q8BQZ5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.16■■□□□ 1.62
Cpsf4Q8BQZ5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Cpsf4Q8BQZ5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf4Q8BQZ5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cpsf4Q8BQZ5 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms