Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.42■■■□□ 2.78
VmacQ8BP01 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
VmacQ8BP01 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VmacQ8BP01 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
VmacQ8BP01 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
VmacQ8BP01 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.77
VmacQ8BP01 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
VmacQ8BP01 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
VmacQ8BP01 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VmacQ8BP01 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.15■■■□□ 2.74
VmacQ8BP01 Gm25262-201ENSMUST00000174934 133 ntBASIC32.13■■■□□ 2.73
VmacQ8BP01 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.09■■■□□ 2.73
VmacQ8BP01 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.07■■■□□ 2.72
VmacQ8BP01 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
VmacQ8BP01 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
VmacQ8BP01 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
VmacQ8BP01 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
VmacQ8BP01 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
VmacQ8BP01 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
VmacQ8BP01 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
VmacQ8BP01 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
VmacQ8BP01 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
VmacQ8BP01 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
VmacQ8BP01 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
VmacQ8BP01 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
VmacQ8BP01 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
VmacQ8BP01 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.83■■■□□ 2.69
VmacQ8BP01 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
VmacQ8BP01 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VmacQ8BP01 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
VmacQ8BP01 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
VmacQ8BP01 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
VmacQ8BP01 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VmacQ8BP01 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
VmacQ8BP01 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.75■■■□□ 2.67
VmacQ8BP01 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
VmacQ8BP01 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VmacQ8BP01 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.62■■■□□ 2.65
VmacQ8BP01 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.53■■■□□ 2.64
VmacQ8BP01 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.52■■■□□ 2.64
VmacQ8BP01 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VmacQ8BP01 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
VmacQ8BP01 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
VmacQ8BP01 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
VmacQ8BP01 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
VmacQ8BP01 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
VmacQ8BP01 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
VmacQ8BP01 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
VmacQ8BP01 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.38■■■□□ 2.61
VmacQ8BP01 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
VmacQ8BP01 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VmacQ8BP01 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VmacQ8BP01 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VmacQ8BP01 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
VmacQ8BP01 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
VmacQ8BP01 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.3■■■□□ 2.6
VmacQ8BP01 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.28■■■□□ 2.6
VmacQ8BP01 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
VmacQ8BP01 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
VmacQ8BP01 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
VmacQ8BP01 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
VmacQ8BP01 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
VmacQ8BP01 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
VmacQ8BP01 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
VmacQ8BP01 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
VmacQ8BP01 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VmacQ8BP01 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
VmacQ8BP01 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
VmacQ8BP01 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.1■■■□□ 2.57
VmacQ8BP01 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
VmacQ8BP01 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
VmacQ8BP01 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
VmacQ8BP01 Gm27322-201ENSMUST00000184007 104 ntBASIC31.09■■■□□ 2.57
VmacQ8BP01 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.09■■■□□ 2.57
VmacQ8BP01 Gm26115-201ENSMUST00000175605 87 ntBASIC31.08■■■□□ 2.57
VmacQ8BP01 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
VmacQ8BP01 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
VmacQ8BP01 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
VmacQ8BP01 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
VmacQ8BP01 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
VmacQ8BP01 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.98■■■□□ 2.55
VmacQ8BP01 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VmacQ8BP01 Gm8109-201ENSMUST00000194076 746 ntBASIC30.97■■■□□ 2.55
VmacQ8BP01 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VmacQ8BP01 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VmacQ8BP01 Mipep-204ENSMUST00000225043 1548 ntBASIC30.94■■■□□ 2.54
VmacQ8BP01 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
VmacQ8BP01 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.91■■■□□ 2.54
VmacQ8BP01 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.86■■■□□ 2.53
VmacQ8BP01 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VmacQ8BP01 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
VmacQ8BP01 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
VmacQ8BP01 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
VmacQ8BP01 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.74■■■□□ 2.51
VmacQ8BP01 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.73■■■□□ 2.51
VmacQ8BP01 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
VmacQ8BP01 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
VmacQ8BP01 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
VmacQ8BP01 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
VmacQ8BP01 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms