Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdhr3Q8BL00 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdhr3Q8BL00 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdhr3Q8BL00 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cdhr3Q8BL00 Gm25238-201ENSMUST00000174914 89 ntBASIC23.92■■□□□ 1.42
Cdhr3Q8BL00 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cdhr3Q8BL00 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.88■■□□□ 1.41
Cdhr3Q8BL00 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cdhr3Q8BL00 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.84■■□□□ 1.41
Cdhr3Q8BL00 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr3Q8BL00 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.81■■□□□ 1.4
Cdhr3Q8BL00 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cdhr3Q8BL00 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cdhr3Q8BL00 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.79■■□□□ 1.4
Cdhr3Q8BL00 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Cdhr3Q8BL00 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cdhr3Q8BL00 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.76■■□□□ 1.39
Cdhr3Q8BL00 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Cdhr3Q8BL00 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdhr3Q8BL00 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdhr3Q8BL00 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cdhr3Q8BL00 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdhr3Q8BL00 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdhr3Q8BL00 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cdhr3Q8BL00 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cdhr3Q8BL00 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Cdhr3Q8BL00 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.58■■□□□ 1.37
Cdhr3Q8BL00 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr3Q8BL00 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr3Q8BL00 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cdhr3Q8BL00 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cdhr3Q8BL00 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cdhr3Q8BL00 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.5■■□□□ 1.35
Cdhr3Q8BL00 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
Cdhr3Q8BL00 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.46■■□□□ 1.35
Cdhr3Q8BL00 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cdhr3Q8BL00 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdhr3Q8BL00 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr3Q8BL00 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr3Q8BL00 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr3Q8BL00 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr3Q8BL00 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.33■■□□□ 1.32
Cdhr3Q8BL00 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr3Q8BL00 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.31■■□□□ 1.32
Cdhr3Q8BL00 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr3Q8BL00 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr3Q8BL00 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdhr3Q8BL00 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdhr3Q8BL00 Rab21-202ENSMUST00000218831 843 ntBASIC23.28■■□□□ 1.32
Cdhr3Q8BL00 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cdhr3Q8BL00 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cdhr3Q8BL00 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.24■■□□□ 1.31
Cdhr3Q8BL00 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdhr3Q8BL00 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.21■■□□□ 1.31
Cdhr3Q8BL00 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.21■■□□□ 1.31
Cdhr3Q8BL00 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdhr3Q8BL00 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cdhr3Q8BL00 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.16■■□□□ 1.3
Cdhr3Q8BL00 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.15■■□□□ 1.3
Cdhr3Q8BL00 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr3Q8BL00 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr3Q8BL00 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr3Q8BL00 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr3Q8BL00 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr3Q8BL00 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cdhr3Q8BL00 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.11■■□□□ 1.29
Cdhr3Q8BL00 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.1■■□□□ 1.29
Cdhr3Q8BL00 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Cdhr3Q8BL00 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdhr3Q8BL00 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Cdhr3Q8BL00 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cdhr3Q8BL00 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Cdhr3Q8BL00 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.05■■□□□ 1.28
Cdhr3Q8BL00 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdhr3Q8BL00 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdhr3Q8BL00 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdhr3Q8BL00 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cdhr3Q8BL00 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdhr3Q8BL00 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Cdhr3Q8BL00 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdhr3Q8BL00 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.96■■□□□ 1.27
Cdhr3Q8BL00 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr3Q8BL00 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Cdhr3Q8BL00 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cdhr3Q8BL00 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdhr3Q8BL00 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cdhr3Q8BL00 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cdhr3Q8BL00 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdhr3Q8BL00 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Cdhr3Q8BL00 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cdhr3Q8BL00 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr3Q8BL00 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cdhr3Q8BL00 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdhr3Q8BL00 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.85■■□□□ 1.25
Cdhr3Q8BL00 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdhr3Q8BL00 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Cdhr3Q8BL00 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cdhr3Q8BL00 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdhr3Q8BL00 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Cdhr3Q8BL00 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms