Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.64■■■□□ 2.5
Kdm1aQ6ZQ88 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Kdm1aQ6ZQ88 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Kdm1aQ6ZQ88 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.57■■■□□ 2.48
Kdm1aQ6ZQ88 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Kdm1aQ6ZQ88 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.48■■■□□ 2.47
Kdm1aQ6ZQ88 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.38■■■□□ 2.45
Kdm1aQ6ZQ88 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Kdm1aQ6ZQ88 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Kdm1aQ6ZQ88 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Kdm1aQ6ZQ88 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Kdm1aQ6ZQ88 Rab21-202ENSMUST00000218831 843 ntBASIC30.29■■■□□ 2.44
Kdm1aQ6ZQ88 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Kdm1aQ6ZQ88 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm1aQ6ZQ88 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Kdm1aQ6ZQ88 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.17■■■□□ 2.42
Kdm1aQ6ZQ88 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Kdm1aQ6ZQ88 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Kdm1aQ6ZQ88 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Kdm1aQ6ZQ88 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Kdm1aQ6ZQ88 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Kdm1aQ6ZQ88 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Kdm1aQ6ZQ88 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.09■■■□□ 2.41
Kdm1aQ6ZQ88 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Kdm1aQ6ZQ88 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Kdm1aQ6ZQ88 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Kdm1aQ6ZQ88 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Kdm1aQ6ZQ88 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Kdm1aQ6ZQ88 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Kdm1aQ6ZQ88 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30■■■□□ 2.39
Kdm1aQ6ZQ88 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Kdm1aQ6ZQ88 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.98■■■□□ 2.39
Kdm1aQ6ZQ88 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.96■■■□□ 2.39
Kdm1aQ6ZQ88 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Kdm1aQ6ZQ88 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.38
Kdm1aQ6ZQ88 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.94■■■□□ 2.38
Kdm1aQ6ZQ88 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Kdm1aQ6ZQ88 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Kdm1aQ6ZQ88 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Kdm1aQ6ZQ88 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Kdm1aQ6ZQ88 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Kdm1aQ6ZQ88 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Kdm1aQ6ZQ88 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.83■■■□□ 2.37
Kdm1aQ6ZQ88 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Kdm1aQ6ZQ88 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Kdm1aQ6ZQ88 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Kdm1aQ6ZQ88 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.76■■■□□ 2.35
Kdm1aQ6ZQ88 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm1aQ6ZQ88 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Kdm1aQ6ZQ88 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Kdm1aQ6ZQ88 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.7■■■□□ 2.35
Kdm1aQ6ZQ88 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Kdm1aQ6ZQ88 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Kdm1aQ6ZQ88 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Kdm1aQ6ZQ88 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Kdm1aQ6ZQ88 Gm25262-201ENSMUST00000174934 133 ntBASIC29.61■■■□□ 2.33
Kdm1aQ6ZQ88 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Kdm1aQ6ZQ88 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Kdm1aQ6ZQ88 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Kdm1aQ6ZQ88 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Kdm1aQ6ZQ88 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Kdm1aQ6ZQ88 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Kdm1aQ6ZQ88 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Kdm1aQ6ZQ88 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
Kdm1aQ6ZQ88 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Kdm1aQ6ZQ88 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Kdm1aQ6ZQ88 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Kdm1aQ6ZQ88 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Kdm1aQ6ZQ88 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Kdm1aQ6ZQ88 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.35■■■□□ 2.29
Kdm1aQ6ZQ88 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Kdm1aQ6ZQ88 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.31■■■□□ 2.28
Kdm1aQ6ZQ88 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Kdm1aQ6ZQ88 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Kdm1aQ6ZQ88 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
Kdm1aQ6ZQ88 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Kdm1aQ6ZQ88 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.21■■■□□ 2.27
Kdm1aQ6ZQ88 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Kdm1aQ6ZQ88 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Kdm1aQ6ZQ88 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Kdm1aQ6ZQ88 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Kdm1aQ6ZQ88 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.15■■■□□ 2.26
Kdm1aQ6ZQ88 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.14■■■□□ 2.26
Kdm1aQ6ZQ88 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Kdm1aQ6ZQ88 Mipep-204ENSMUST00000225043 1548 ntBASIC29.14■■■□□ 2.25
Kdm1aQ6ZQ88 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Kdm1aQ6ZQ88 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Kdm1aQ6ZQ88 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Kdm1aQ6ZQ88 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Kdm1aQ6ZQ88 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.06■■■□□ 2.24
Kdm1aQ6ZQ88 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Kdm1aQ6ZQ88 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Kdm1aQ6ZQ88 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Kdm1aQ6ZQ88 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Kdm1aQ6ZQ88 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.99■■■□□ 2.23
Kdm1aQ6ZQ88 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.98■■■□□ 2.23
Kdm1aQ6ZQ88 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Kdm1aQ6ZQ88 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Kdm1aQ6ZQ88 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Kdm1aQ6ZQ88 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms