Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Smarcc2Q6PDG5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.43■■■□□ 2.78
Smarcc2Q6PDG5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.43■■■□□ 2.78
Smarcc2Q6PDG5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Smarcc2Q6PDG5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
Smarcc2Q6PDG5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Smarcc2Q6PDG5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Smarcc2Q6PDG5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.3■■■□□ 2.76
Smarcc2Q6PDG5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Smarcc2Q6PDG5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Smarcc2Q6PDG5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Smarcc2Q6PDG5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Smarcc2Q6PDG5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Smarcc2Q6PDG5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Smarcc2Q6PDG5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Smarcc2Q6PDG5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Smarcc2Q6PDG5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.11■■■□□ 2.73
Smarcc2Q6PDG5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.09■■■□□ 2.73
Smarcc2Q6PDG5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Smarcc2Q6PDG5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Smarcc2Q6PDG5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Smarcc2Q6PDG5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.93■■■□□ 2.7
Smarcc2Q6PDG5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Smarcc2Q6PDG5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smarcc2Q6PDG5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Smarcc2Q6PDG5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Smarcc2Q6PDG5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
Smarcc2Q6PDG5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.83■■■□□ 2.69
Smarcc2Q6PDG5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Smarcc2Q6PDG5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
Smarcc2Q6PDG5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.81■■■□□ 2.68
Smarcc2Q6PDG5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.8■■■□□ 2.68
Smarcc2Q6PDG5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Smarcc2Q6PDG5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.74■■■□□ 2.67
Smarcc2Q6PDG5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Smarcc2Q6PDG5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Smarcc2Q6PDG5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
Smarcc2Q6PDG5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Smarcc2Q6PDG5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Smarcc2Q6PDG5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Smarcc2Q6PDG5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Smarcc2Q6PDG5 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.63■■■□□ 2.65
Smarcc2Q6PDG5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Smarcc2Q6PDG5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.61■■■□□ 2.65
Smarcc2Q6PDG5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Smarcc2Q6PDG5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Smarcc2Q6PDG5 Gm26115-201ENSMUST00000175605 87 ntBASIC31.6■■■□□ 2.65
Smarcc2Q6PDG5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
Smarcc2Q6PDG5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Smarcc2Q6PDG5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Smarcc2Q6PDG5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Smarcc2Q6PDG5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Smarcc2Q6PDG5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Smarcc2Q6PDG5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Smarcc2Q6PDG5 Gm8109-201ENSMUST00000194076 746 ntBASIC31.46■■■□□ 2.63
Smarcc2Q6PDG5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Smarcc2Q6PDG5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Smarcc2Q6PDG5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Smarcc2Q6PDG5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Smarcc2Q6PDG5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Smarcc2Q6PDG5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.34■■■□□ 2.61
Smarcc2Q6PDG5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Smarcc2Q6PDG5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.31■■■□□ 2.6
Smarcc2Q6PDG5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Smarcc2Q6PDG5 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.28■■■□□ 2.6
Smarcc2Q6PDG5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Smarcc2Q6PDG5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Smarcc2Q6PDG5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Smarcc2Q6PDG5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Smarcc2Q6PDG5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
Smarcc2Q6PDG5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
Smarcc2Q6PDG5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Smarcc2Q6PDG5 Gm27322-201ENSMUST00000184007 104 ntBASIC31.13■■■□□ 2.57
Smarcc2Q6PDG5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Smarcc2Q6PDG5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Smarcc2Q6PDG5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Smarcc2Q6PDG5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Smarcc2Q6PDG5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
Smarcc2Q6PDG5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Smarcc2Q6PDG5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Smarcc2Q6PDG5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Smarcc2Q6PDG5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Smarcc2Q6PDG5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Smarcc2Q6PDG5 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.94■■■□□ 2.54
Smarcc2Q6PDG5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Smarcc2Q6PDG5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Smarcc2Q6PDG5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.91■■■□□ 2.54
Smarcc2Q6PDG5 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.91■■■□□ 2.54
Smarcc2Q6PDG5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
Smarcc2Q6PDG5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Smarcc2Q6PDG5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Smarcc2Q6PDG5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Smarcc2Q6PDG5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Smarcc2Q6PDG5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Smarcc2Q6PDG5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.79■■■□□ 2.52
Smarcc2Q6PDG5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Smarcc2Q6PDG5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Smarcc2Q6PDG5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Smarcc2Q6PDG5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Smarcc2Q6PDG5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 306.2 ms