Protein–RNA interactions for Protein: Q62203

Sf3a2, Splicing factor 3A subunit 2, mousemouse

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a2Q62203 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a2Q62203 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sf3a2Q62203 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sf3a2Q62203 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a2Q62203 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sf3a2Q62203 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a2Q62203 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sf3a2Q62203 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sf3a2Q62203 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.69■■□□□ 1.06
Sf3a2Q62203 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a2Q62203 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a2Q62203 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sf3a2Q62203 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.67■■□□□ 1.06
Sf3a2Q62203 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.67■■□□□ 1.06
Sf3a2Q62203 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3a2Q62203 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a2Q62203 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a2Q62203 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a2Q62203 Gm25238-201ENSMUST00000174914 89 ntBASIC21.58■■□□□ 1.05
Sf3a2Q62203 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.57■■□□□ 1.04
Sf3a2Q62203 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sf3a2Q62203 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sf3a2Q62203 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.49■■□□□ 1.03
Sf3a2Q62203 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.49■■□□□ 1.03
Sf3a2Q62203 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sf3a2Q62203 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Sf3a2Q62203 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sf3a2Q62203 Zxda-201ENSMUST00000117281 2621 ntBASIC21.45■■□□□ 1.02
Sf3a2Q62203 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sf3a2Q62203 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sf3a2Q62203 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.4■■□□□ 1.02
Sf3a2Q62203 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a2Q62203 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sf3a2Q62203 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a2Q62203 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a2Q62203 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a2Q62203 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sf3a2Q62203 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.28■■□□□ 1
Sf3a2Q62203 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sf3a2Q62203 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sf3a2Q62203 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a2Q62203 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a2Q62203 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a2Q62203 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a2Q62203 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a2Q62203 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.18■□□□□ 0.98
Sf3a2Q62203 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Sf3a2Q62203 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.16■□□□□ 0.98
Sf3a2Q62203 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sf3a2Q62203 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sf3a2Q62203 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sf3a2Q62203 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sf3a2Q62203 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.08■□□□□ 0.96
Sf3a2Q62203 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.07■□□□□ 0.96
Sf3a2Q62203 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sf3a2Q62203 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sf3a2Q62203 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sf3a2Q62203 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3a2Q62203 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21■□□□□ 0.95
Sf3a2Q62203 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21■□□□□ 0.95
Sf3a2Q62203 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sf3a2Q62203 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3a2Q62203 Rab21-202ENSMUST00000218831 843 ntBASIC20.97■□□□□ 0.95
Sf3a2Q62203 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a2Q62203 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a2Q62203 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a2Q62203 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a2Q62203 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Sf3a2Q62203 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a2Q62203 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a2Q62203 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a2Q62203 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a2Q62203 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a2Q62203 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a2Q62203 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a2Q62203 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a2Q62203 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a2Q62203 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a2Q62203 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a2Q62203 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a2Q62203 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.9■□□□□ 0.94
Sf3a2Q62203 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a2Q62203 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
Sf3a2Q62203 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sf3a2Q62203 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.87■□□□□ 0.93
Sf3a2Q62203 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a2Q62203 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.85■□□□□ 0.93
Sf3a2Q62203 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.84■□□□□ 0.93
Sf3a2Q62203 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a2Q62203 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sf3a2Q62203 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.82■□□□□ 0.92
Sf3a2Q62203 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a2Q62203 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sf3a2Q62203 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sf3a2Q62203 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sf3a2Q62203 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sf3a2Q62203 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sf3a2Q62203 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a2Q62203 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sf3a2Q62203 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms