Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Ift88Q61371 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ift88Q61371 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ift88Q61371 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.34■■■□□ 2.45
Ift88Q61371 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ift88Q61371 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ift88Q61371 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ift88Q61371 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.31■■■□□ 2.44
Ift88Q61371 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ift88Q61371 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
Ift88Q61371 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.27■■■□□ 2.44
Ift88Q61371 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ift88Q61371 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.19■■■□□ 2.42
Ift88Q61371 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ift88Q61371 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ift88Q61371 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.12■■■□□ 2.41
Ift88Q61371 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ift88Q61371 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ift88Q61371 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ift88Q61371 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ift88Q61371 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Ift88Q61371 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ift88Q61371 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ift88Q61371 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.96■■■□□ 2.39
Ift88Q61371 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
Ift88Q61371 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ift88Q61371 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ift88Q61371 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ift88Q61371 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ift88Q61371 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.87■■■□□ 2.37
Ift88Q61371 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Ift88Q61371 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ift88Q61371 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.82■■■□□ 2.36
Ift88Q61371 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ift88Q61371 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ift88Q61371 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ift88Q61371 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.69■■■□□ 2.34
Ift88Q61371 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ift88Q61371 Rab21-202ENSMUST00000218831 843 ntBASIC29.63■■■□□ 2.33
Ift88Q61371 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ift88Q61371 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ift88Q61371 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ift88Q61371 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ift88Q61371 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ift88Q61371 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ift88Q61371 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ift88Q61371 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.52■■■□□ 2.32
Ift88Q61371 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ift88Q61371 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.5■■■□□ 2.31
Ift88Q61371 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.49■■■□□ 2.31
Ift88Q61371 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ift88Q61371 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.49■■■□□ 2.31
Ift88Q61371 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Ift88Q61371 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.45■■■□□ 2.31
Ift88Q61371 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ift88Q61371 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Ift88Q61371 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ift88Q61371 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.41■■■□□ 2.3
Ift88Q61371 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
Ift88Q61371 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ift88Q61371 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Ift88Q61371 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ift88Q61371 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ift88Q61371 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ift88Q61371 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.32■■■□□ 2.28
Ift88Q61371 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ift88Q61371 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ift88Q61371 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ift88Q61371 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.26■■■□□ 2.28
Ift88Q61371 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift88Q61371 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ift88Q61371 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ift88Q61371 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Ift88Q61371 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift88Q61371 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ift88Q61371 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.22■■■□□ 2.27
Ift88Q61371 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ift88Q61371 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.21■■■□□ 2.27
Ift88Q61371 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Ift88Q61371 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ift88Q61371 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.19■■■□□ 2.26
Ift88Q61371 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ift88Q61371 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ift88Q61371 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Ift88Q61371 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ift88Q61371 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Ift88Q61371 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Ift88Q61371 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ift88Q61371 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ift88Q61371 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ift88Q61371 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
Ift88Q61371 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ift88Q61371 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ift88Q61371 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ift88Q61371 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Ift88Q61371 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
Ift88Q61371 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Ift88Q61371 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ift88Q61371 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.93■■■□□ 2.22
Ift88Q61371 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms