Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cln6Q3U466 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cln6Q3U466 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cln6Q3U466 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cln6Q3U466 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cln6Q3U466 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.88■■□□□ 1.25
Cln6Q3U466 Gm25238-201ENSMUST00000174914 89 ntBASIC22.86■■□□□ 1.25
Cln6Q3U466 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.86■■□□□ 1.25
Cln6Q3U466 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.84■■□□□ 1.25
Cln6Q3U466 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Cln6Q3U466 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cln6Q3U466 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln6Q3U466 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln6Q3U466 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.73■■□□□ 1.23
Cln6Q3U466 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cln6Q3U466 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cln6Q3U466 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cln6Q3U466 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cln6Q3U466 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cln6Q3U466 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.63■■□□□ 1.21
Cln6Q3U466 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cln6Q3U466 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cln6Q3U466 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cln6Q3U466 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cln6Q3U466 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cln6Q3U466 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.57■■□□□ 1.2
Cln6Q3U466 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Cln6Q3U466 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cln6Q3U466 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.56■■□□□ 1.2
Cln6Q3U466 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cln6Q3U466 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Cln6Q3U466 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Cln6Q3U466 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.53■■□□□ 1.2
Cln6Q3U466 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cln6Q3U466 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cln6Q3U466 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Cln6Q3U466 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cln6Q3U466 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.46■■□□□ 1.19
Cln6Q3U466 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cln6Q3U466 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cln6Q3U466 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cln6Q3U466 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cln6Q3U466 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cln6Q3U466 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Cln6Q3U466 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cln6Q3U466 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.41■■□□□ 1.18
Cln6Q3U466 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cln6Q3U466 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cln6Q3U466 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cln6Q3U466 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cln6Q3U466 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.37■■□□□ 1.17
Cln6Q3U466 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.36■■□□□ 1.17
Cln6Q3U466 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cln6Q3U466 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cln6Q3U466 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.34■■□□□ 1.17
Cln6Q3U466 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cln6Q3U466 Rab21-202ENSMUST00000218831 843 ntBASIC22.31■■□□□ 1.16
Cln6Q3U466 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cln6Q3U466 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cln6Q3U466 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cln6Q3U466 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cln6Q3U466 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.22■■□□□ 1.15
Cln6Q3U466 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cln6Q3U466 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cln6Q3U466 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cln6Q3U466 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cln6Q3U466 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cln6Q3U466 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
Cln6Q3U466 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cln6Q3U466 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.15■■□□□ 1.14
Cln6Q3U466 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.15■■□□□ 1.14
Cln6Q3U466 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cln6Q3U466 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cln6Q3U466 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cln6Q3U466 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cln6Q3U466 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cln6Q3U466 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cln6Q3U466 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cln6Q3U466 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cln6Q3U466 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.08■■□□□ 1.13
Cln6Q3U466 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cln6Q3U466 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cln6Q3U466 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cln6Q3U466 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cln6Q3U466 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cln6Q3U466 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cln6Q3U466 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cln6Q3U466 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cln6Q3U466 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cln6Q3U466 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cln6Q3U466 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Cln6Q3U466 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cln6Q3U466 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cln6Q3U466 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.96■■□□□ 1.11
Cln6Q3U466 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cln6Q3U466 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.88■■□□□ 1.09
Cln6Q3U466 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms