Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LdlrP35951 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
LdlrP35951 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LdlrP35951 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LdlrP35951 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.28■■□□□ 1.96
LdlrP35951 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LdlrP35951 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
LdlrP35951 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LdlrP35951 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.2■■□□□ 1.94
LdlrP35951 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LdlrP35951 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.14■■□□□ 1.94
LdlrP35951 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
LdlrP35951 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LdlrP35951 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LdlrP35951 Gm27325-201ENSMUST00000175467 74 ntBASIC27.11■■□□□ 1.93
LdlrP35951 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LdlrP35951 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
LdlrP35951 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.08■■□□□ 1.93
LdlrP35951 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.02■■□□□ 1.92
LdlrP35951 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27■■□□□ 1.91
LdlrP35951 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LdlrP35951 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
LdlrP35951 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.92■■□□□ 1.9
LdlrP35951 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LdlrP35951 Gm26115-201ENSMUST00000175605 87 ntBASIC26.86■■□□□ 1.89
LdlrP35951 Rab21-202ENSMUST00000218831 843 ntBASIC26.86■■□□□ 1.89
LdlrP35951 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
LdlrP35951 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LdlrP35951 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.82■■□□□ 1.88
LdlrP35951 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
LdlrP35951 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LdlrP35951 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
LdlrP35951 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
LdlrP35951 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.77■■□□□ 1.88
LdlrP35951 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LdlrP35951 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LdlrP35951 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
LdlrP35951 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
LdlrP35951 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LdlrP35951 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LdlrP35951 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
LdlrP35951 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LdlrP35951 Gm8109-201ENSMUST00000194076 746 ntBASIC26.64■■□□□ 1.86
LdlrP35951 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.64■■□□□ 1.85
LdlrP35951 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LdlrP35951 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
LdlrP35951 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.57■■□□□ 1.84
LdlrP35951 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LdlrP35951 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LdlrP35951 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LdlrP35951 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
LdlrP35951 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.47■■□□□ 1.83
LdlrP35951 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LdlrP35951 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
LdlrP35951 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LdlrP35951 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LdlrP35951 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.43■■□□□ 1.82
LdlrP35951 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.41■■□□□ 1.82
LdlrP35951 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
LdlrP35951 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.39■■□□□ 1.82
LdlrP35951 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LdlrP35951 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.38■■□□□ 1.81
LdlrP35951 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LdlrP35951 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
LdlrP35951 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.33■■□□□ 1.81
LdlrP35951 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
LdlrP35951 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LdlrP35951 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LdlrP35951 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LdlrP35951 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LdlrP35951 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LdlrP35951 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LdlrP35951 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
LdlrP35951 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.22■■□□□ 1.79
LdlrP35951 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
LdlrP35951 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
LdlrP35951 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.19■■□□□ 1.78
LdlrP35951 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LdlrP35951 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LdlrP35951 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LdlrP35951 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LdlrP35951 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
LdlrP35951 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.11■■□□□ 1.77
LdlrP35951 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LdlrP35951 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LdlrP35951 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LdlrP35951 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LdlrP35951 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LdlrP35951 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LdlrP35951 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
LdlrP35951 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LdlrP35951 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
LdlrP35951 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.99■■□□□ 1.75
LdlrP35951 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.99■■□□□ 1.75
LdlrP35951 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.99■■□□□ 1.75
LdlrP35951 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
LdlrP35951 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
LdlrP35951 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LdlrP35951 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.95■■□□□ 1.74
LdlrP35951 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms