Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.64■■□□□ 1.06
P04944 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
P04944 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P04944 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P04944 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
P04944 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
P04944 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.44■■□□□ 1.02
P04944 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P04944 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P04944 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.42■■□□□ 1.02
P04944 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04944 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
P04944 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.4■■□□□ 1.02
P04944 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
P04944 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
P04944 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.36■■□□□ 1.01
P04944 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P04944 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
P04944 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04944 Rab21-202ENSMUST00000218831 843 ntBASIC21.28■■□□□ 1
P04944 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P04944 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04944 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04944 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04944 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04944 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P04944 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.2■□□□□ 0.98
P04944 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.19■□□□□ 0.98
P04944 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04944 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
P04944 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
P04944 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.13■□□□□ 0.97
P04944 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P04944 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04944 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P04944 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
P04944 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
P04944 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.09■□□□□ 0.97
P04944 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04944 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04944 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
P04944 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.06■□□□□ 0.96
P04944 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P04944 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.01■□□□□ 0.95
P04944 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
P04944 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21■□□□□ 0.95
P04944 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P04944 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P04944 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P04944 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04944 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04944 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.94■□□□□ 0.94
P04944 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P04944 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04944 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04944 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
P04944 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04944 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
P04944 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04944 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04944 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
P04944 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04944 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04944 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04944 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P04944 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.82■□□□□ 0.92
P04944 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04944 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04944 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
P04944 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P04944 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P04944 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
P04944 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
P04944 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
P04944 Gm25262-201ENSMUST00000174934 133 ntBASIC20.69■□□□□ 0.9
P04944 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.67■□□□□ 0.9
P04944 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.67■□□□□ 0.9
P04944 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04944 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04944 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.65■□□□□ 0.9
P04944 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04944 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04944 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04944 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04944 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04944 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04944 Mipep-204ENSMUST00000225043 1548 ntBASIC20.55■□□□□ 0.88
P04944 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04944 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04944 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P04944 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P04944 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.48■□□□□ 0.87
P04944 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.47■□□□□ 0.87
P04944 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04944 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
P04944 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
P04944 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.44■□□□□ 0.86
P04944 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P04944 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
P04944 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms