Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
IghmP01872 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.1■■□□□ 1.77
IghmP01872 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
IghmP01872 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
IghmP01872 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
IghmP01872 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
IghmP01872 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
IghmP01872 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
IghmP01872 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
IghmP01872 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
IghmP01872 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
IghmP01872 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
IghmP01872 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.84■■□□□ 1.73
IghmP01872 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
IghmP01872 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.81■■□□□ 1.72
IghmP01872 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
IghmP01872 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.8■■□□□ 1.72
IghmP01872 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
IghmP01872 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
IghmP01872 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
IghmP01872 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.74■■□□□ 1.71
IghmP01872 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
IghmP01872 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
IghmP01872 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.67■■□□□ 1.7
IghmP01872 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
IghmP01872 Rab21-202ENSMUST00000218831 843 ntBASIC25.63■■□□□ 1.69
IghmP01872 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
IghmP01872 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
IghmP01872 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.59■■□□□ 1.69
IghmP01872 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
IghmP01872 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IghmP01872 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
IghmP01872 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
IghmP01872 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
IghmP01872 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
IghmP01872 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
IghmP01872 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.45■■□□□ 1.66
IghmP01872 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.44■■□□□ 1.66
IghmP01872 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
IghmP01872 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
IghmP01872 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
IghmP01872 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
IghmP01872 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
IghmP01872 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
IghmP01872 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.37■■□□□ 1.65
IghmP01872 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
IghmP01872 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
IghmP01872 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
IghmP01872 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.33■■□□□ 1.65
IghmP01872 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
IghmP01872 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
IghmP01872 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
IghmP01872 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
IghmP01872 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.29■■□□□ 1.64
IghmP01872 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
IghmP01872 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
IghmP01872 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
IghmP01872 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
IghmP01872 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
IghmP01872 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
IghmP01872 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
IghmP01872 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
IghmP01872 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
IghmP01872 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
IghmP01872 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.2■■□□□ 1.63
IghmP01872 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
IghmP01872 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
IghmP01872 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
IghmP01872 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
IghmP01872 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
IghmP01872 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
IghmP01872 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
IghmP01872 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
IghmP01872 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
IghmP01872 Gm6658-202ENSMUST00000209493 1885 ntBASIC25■■□□□ 1.59
IghmP01872 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25■■□□□ 1.59
IghmP01872 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
IghmP01872 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
IghmP01872 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
IghmP01872 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.94■■□□□ 1.58
IghmP01872 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
IghmP01872 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.91■■□□□ 1.58
IghmP01872 Gm25262-201ENSMUST00000174934 133 ntBASIC24.9■■□□□ 1.58
IghmP01872 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
IghmP01872 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
IghmP01872 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
IghmP01872 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
IghmP01872 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
IghmP01872 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
IghmP01872 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
IghmP01872 Mipep-204ENSMUST00000225043 1548 ntBASIC24.81■■□□□ 1.56
IghmP01872 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
IghmP01872 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
IghmP01872 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.75■■□□□ 1.55
IghmP01872 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.74■■□□□ 1.55
IghmP01872 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
IghmP01872 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
IghmP01872 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
IghmP01872 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.71■■□□□ 1.55
IghmP01872 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms