Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh2d1aO88890 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh2d1aO88890 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1aO88890 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d1aO88890 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh2d1aO88890 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
Sh2d1aO88890 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh2d1aO88890 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh2d1aO88890 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh2d1aO88890 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh2d1aO88890 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.16■□□□□ 0.66
Sh2d1aO88890 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh2d1aO88890 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh2d1aO88890 Rab21-202ENSMUST00000218831 843 ntBASIC19.07■□□□□ 0.64
Sh2d1aO88890 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.05■□□□□ 0.64
Sh2d1aO88890 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh2d1aO88890 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh2d1aO88890 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh2d1aO88890 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.97■□□□□ 0.63
Sh2d1aO88890 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d1aO88890 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Sh2d1aO88890 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d1aO88890 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d1aO88890 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d1aO88890 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh2d1aO88890 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d1aO88890 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.86■□□□□ 0.61
Sh2d1aO88890 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.85■□□□□ 0.61
Sh2d1aO88890 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.85■□□□□ 0.61
Sh2d1aO88890 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d1aO88890 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d1aO88890 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d1aO88890 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.82■□□□□ 0.6
Sh2d1aO88890 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1aO88890 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1aO88890 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1aO88890 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1aO88890 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1aO88890 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1aO88890 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sh2d1aO88890 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.77■□□□□ 0.6
Sh2d1aO88890 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sh2d1aO88890 Gm25262-201ENSMUST00000174934 133 ntBASIC18.75■□□□□ 0.59
Sh2d1aO88890 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d1aO88890 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d1aO88890 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d1aO88890 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh2d1aO88890 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d1aO88890 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d1aO88890 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh2d1aO88890 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh2d1aO88890 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh2d1aO88890 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d1aO88890 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh2d1aO88890 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sh2d1aO88890 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.58■□□□□ 0.57
Sh2d1aO88890 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh2d1aO88890 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sh2d1aO88890 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d1aO88890 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d1aO88890 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.54■□□□□ 0.56
Sh2d1aO88890 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d1aO88890 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d1aO88890 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh2d1aO88890 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sh2d1aO88890 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sh2d1aO88890 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.43■□□□□ 0.54
Sh2d1aO88890 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh2d1aO88890 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh2d1aO88890 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d1aO88890 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d1aO88890 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d1aO88890 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh2d1aO88890 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sh2d1aO88890 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh2d1aO88890 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.38■□□□□ 0.53
Sh2d1aO88890 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sh2d1aO88890 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sh2d1aO88890 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sh2d1aO88890 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d1aO88890 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.34■□□□□ 0.53
Sh2d1aO88890 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d1aO88890 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d1aO88890 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d1aO88890 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.32■□□□□ 0.52
Sh2d1aO88890 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d1aO88890 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.31■□□□□ 0.52
Sh2d1aO88890 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2d1aO88890 Mipep-204ENSMUST00000225043 1548 ntBASIC18.28■□□□□ 0.52
Sh2d1aO88890 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
Sh2d1aO88890 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d1aO88890 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2d1aO88890 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2d1aO88890 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sh2d1aO88890 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2d1aO88890 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sh2d1aO88890 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh2d1aO88890 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh2d1aO88890 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.23■□□□□ 0.51
Sh2d1aO88890 Gm27322-201ENSMUST00000184007 104 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms