Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SncaO55042 Gm25238-201ENSMUST00000174914 89 ntBASIC22.46■■□□□ 1.19
SncaO55042 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SncaO55042 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
SncaO55042 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.41■■□□□ 1.18
SncaO55042 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SncaO55042 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.38■■□□□ 1.17
SncaO55042 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SncaO55042 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SncaO55042 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SncaO55042 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.29■■□□□ 1.16
SncaO55042 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SncaO55042 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SncaO55042 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SncaO55042 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SncaO55042 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SncaO55042 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SncaO55042 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SncaO55042 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SncaO55042 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SncaO55042 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.1■■□□□ 1.13
SncaO55042 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SncaO55042 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.09■■□□□ 1.13
SncaO55042 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SncaO55042 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SncaO55042 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.03■■□□□ 1.12
SncaO55042 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.03■■□□□ 1.12
SncaO55042 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SncaO55042 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SncaO55042 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SncaO55042 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.96■■□□□ 1.11
SncaO55042 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SncaO55042 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SncaO55042 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SncaO55042 Rab21-202ENSMUST00000218831 843 ntBASIC21.89■■□□□ 1.09
SncaO55042 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SncaO55042 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.87■■□□□ 1.09
SncaO55042 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SncaO55042 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SncaO55042 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SncaO55042 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SncaO55042 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SncaO55042 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SncaO55042 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SncaO55042 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SncaO55042 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.78■■□□□ 1.08
SncaO55042 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SncaO55042 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SncaO55042 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.75■■□□□ 1.07
SncaO55042 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SncaO55042 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.73■■□□□ 1.07
SncaO55042 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SncaO55042 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SncaO55042 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SncaO55042 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.69■■□□□ 1.06
SncaO55042 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SncaO55042 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SncaO55042 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SncaO55042 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SncaO55042 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SncaO55042 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SncaO55042 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SncaO55042 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SncaO55042 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SncaO55042 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SncaO55042 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SncaO55042 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SncaO55042 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.62■■□□□ 1.05
SncaO55042 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SncaO55042 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SncaO55042 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SncaO55042 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SncaO55042 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SncaO55042 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.59■■□□□ 1.05
SncaO55042 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SncaO55042 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.58■■□□□ 1.05
SncaO55042 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SncaO55042 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SncaO55042 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SncaO55042 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SncaO55042 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SncaO55042 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.54■■□□□ 1.04
SncaO55042 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SncaO55042 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SncaO55042 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.47■■□□□ 1.03
SncaO55042 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.47■■□□□ 1.03
SncaO55042 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SncaO55042 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SncaO55042 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SncaO55042 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.41■■□□□ 1.02
SncaO55042 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SncaO55042 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SncaO55042 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SncaO55042 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SncaO55042 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SncaO55042 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SncaO55042 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SncaO55042 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SncaO55042 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SncaO55042 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms