Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Sema4dO09126 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.11■■■□□ 2.41
Sema4dO09126 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Sema4dO09126 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.08■■■□□ 2.41
Sema4dO09126 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Sema4dO09126 Gm25262-201ENSMUST00000174934 133 ntBASIC30.04■■■□□ 2.4
Sema4dO09126 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Sema4dO09126 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Sema4dO09126 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Sema4dO09126 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.98■■■□□ 2.39
Sema4dO09126 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Sema4dO09126 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.94■■■□□ 2.38
Sema4dO09126 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sema4dO09126 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Sema4dO09126 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Sema4dO09126 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Sema4dO09126 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Sema4dO09126 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Sema4dO09126 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Sema4dO09126 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Sema4dO09126 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Sema4dO09126 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Sema4dO09126 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.64■■■□□ 2.34
Sema4dO09126 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Sema4dO09126 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Sema4dO09126 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.59■■■□□ 2.33
Sema4dO09126 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Sema4dO09126 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
Sema4dO09126 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Sema4dO09126 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Sema4dO09126 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Sema4dO09126 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Sema4dO09126 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.51■■■□□ 2.31
Sema4dO09126 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.49■■■□□ 2.31
Sema4dO09126 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.47■■■□□ 2.31
Sema4dO09126 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Sema4dO09126 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Sema4dO09126 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.41■■■□□ 2.3
Sema4dO09126 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Sema4dO09126 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.38■■■□□ 2.29
Sema4dO09126 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sema4dO09126 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Sema4dO09126 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Sema4dO09126 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Sema4dO09126 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Sema4dO09126 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Sema4dO09126 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.31■■■□□ 2.28
Sema4dO09126 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Sema4dO09126 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Sema4dO09126 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Sema4dO09126 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Sema4dO09126 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Sema4dO09126 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sema4dO09126 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Sema4dO09126 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.17■■■□□ 2.26
Sema4dO09126 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Sema4dO09126 Gm26115-201ENSMUST00000175605 87 ntBASIC29.15■■■□□ 2.26
Sema4dO09126 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Sema4dO09126 Gm8109-201ENSMUST00000194076 746 ntBASIC29.08■■■□□ 2.25
Sema4dO09126 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Sema4dO09126 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Sema4dO09126 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.06■■■□□ 2.24
Sema4dO09126 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
Sema4dO09126 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Sema4dO09126 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Sema4dO09126 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Sema4dO09126 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Sema4dO09126 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Sema4dO09126 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Sema4dO09126 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Sema4dO09126 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Sema4dO09126 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.89■■■□□ 2.22
Sema4dO09126 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Sema4dO09126 Gm27322-201ENSMUST00000184007 104 ntBASIC28.88■■■□□ 2.21
Sema4dO09126 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Sema4dO09126 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.86■■■□□ 2.21
Sema4dO09126 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Sema4dO09126 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Sema4dO09126 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Sema4dO09126 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.83■■■□□ 2.2
Sema4dO09126 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Sema4dO09126 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Sema4dO09126 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.75■■■□□ 2.19
Sema4dO09126 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Sema4dO09126 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Sema4dO09126 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Sema4dO09126 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Sema4dO09126 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Sema4dO09126 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Sema4dO09126 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.62■■■□□ 2.17
Sema4dO09126 Mipep-204ENSMUST00000225043 1548 ntBASIC28.62■■■□□ 2.17
Sema4dO09126 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.6■■■□□ 2.17
Sema4dO09126 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.57■■■□□ 2.16
Sema4dO09126 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Sema4dO09126 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Sema4dO09126 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sema4dO09126 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.53■■■□□ 2.16
Sema4dO09126 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Sema4dO09126 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Sema4dO09126 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms