Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.47■■□□□ 1.51
Trav13d-3J3QMG8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trav13d-3J3QMG8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trav13d-3J3QMG8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trav13d-3J3QMG8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Trav13d-3J3QMG8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trav13d-3J3QMG8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trav13d-3J3QMG8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.36■■□□□ 1.49
Trav13d-3J3QMG8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav13d-3J3QMG8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Trav13d-3J3QMG8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trav13d-3J3QMG8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Trav13d-3J3QMG8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trav13d-3J3QMG8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trav13d-3J3QMG8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trav13d-3J3QMG8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trav13d-3J3QMG8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.19■■□□□ 1.46
Trav13d-3J3QMG8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Trav13d-3J3QMG8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.15■■□□□ 1.46
Trav13d-3J3QMG8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Trav13d-3J3QMG8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.13■■□□□ 1.45
Trav13d-3J3QMG8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trav13d-3J3QMG8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trav13d-3J3QMG8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trav13d-3J3QMG8 Gm25262-201ENSMUST00000174934 133 ntBASIC24.09■■□□□ 1.45
Trav13d-3J3QMG8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav13d-3J3QMG8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Trav13d-3J3QMG8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.07■■□□□ 1.44
Trav13d-3J3QMG8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Trav13d-3J3QMG8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav13d-3J3QMG8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav13d-3J3QMG8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Trav13d-3J3QMG8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trav13d-3J3QMG8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav13d-3J3QMG8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav13d-3J3QMG8 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.98■■□□□ 1.43
Trav13d-3J3QMG8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trav13d-3J3QMG8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trav13d-3J3QMG8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trav13d-3J3QMG8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trav13d-3J3QMG8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trav13d-3J3QMG8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trav13d-3J3QMG8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trav13d-3J3QMG8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trav13d-3J3QMG8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.78■■□□□ 1.4
Trav13d-3J3QMG8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trav13d-3J3QMG8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trav13d-3J3QMG8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Trav13d-3J3QMG8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trav13d-3J3QMG8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trav13d-3J3QMG8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Trav13d-3J3QMG8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trav13d-3J3QMG8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trav13d-3J3QMG8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trav13d-3J3QMG8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trav13d-3J3QMG8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Trav13d-3J3QMG8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.64■■□□□ 1.37
Trav13d-3J3QMG8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trav13d-3J3QMG8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.63■■□□□ 1.37
Trav13d-3J3QMG8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Trav13d-3J3QMG8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trav13d-3J3QMG8 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.58■■□□□ 1.37
Trav13d-3J3QMG8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav13d-3J3QMG8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Trav13d-3J3QMG8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.53■■□□□ 1.36
Trav13d-3J3QMG8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav13d-3J3QMG8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trav13d-3J3QMG8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Trav13d-3J3QMG8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav13d-3J3QMG8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.48■■□□□ 1.35
Trav13d-3J3QMG8 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.46■■□□□ 1.35
Trav13d-3J3QMG8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trav13d-3J3QMG8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trav13d-3J3QMG8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Trav13d-3J3QMG8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trav13d-3J3QMG8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav13d-3J3QMG8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trav13d-3J3QMG8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Trav13d-3J3QMG8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.37■■□□□ 1.33
Trav13d-3J3QMG8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Trav13d-3J3QMG8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trav13d-3J3QMG8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trav13d-3J3QMG8 Gm27322-201ENSMUST00000184007 104 ntBASIC23.36■■□□□ 1.33
Trav13d-3J3QMG8 Mipep-204ENSMUST00000225043 1548 ntBASIC23.36■■□□□ 1.33
Trav13d-3J3QMG8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav13d-3J3QMG8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
Trav13d-3J3QMG8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trav13d-3J3QMG8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trav13d-3J3QMG8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trav13d-3J3QMG8 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.3■■□□□ 1.32
Trav13d-3J3QMG8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trav13d-3J3QMG8 Gm26115-201ENSMUST00000175605 87 ntBASIC23.29■■□□□ 1.32
Trav13d-3J3QMG8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.29■■□□□ 1.32
Trav13d-3J3QMG8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.27■■□□□ 1.32
Trav13d-3J3QMG8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trav13d-3J3QMG8 Gm8109-201ENSMUST00000194076 746 ntBASIC23.25■■□□□ 1.31
Trav13d-3J3QMG8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trav13d-3J3QMG8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Trav13d-3J3QMG8 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.21■■□□□ 1.31
Trav13d-3J3QMG8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms