Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.3■■□□□ 1.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.2■■□□□ 1.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trav15d-2-dv6d-2A0A0G2JGQ7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
Trav15d-2-dv6d-2A0A0G2JGQ7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24■■□□□ 1.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trav15d-2-dv6d-2A0A0G2JGQ7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.95■■□□□ 1.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.93■■□□□ 1.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.93■■□□□ 1.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.83■■□□□ 1.41
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.78■■□□□ 1.4
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab21-202ENSMUST00000218831 843 ntBASIC23.73■■□□□ 1.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trav15d-2-dv6d-2A0A0G2JGQ7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.58■■□□□ 1.37
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.56■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.54■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.53■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.47■■□□□ 1.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.39■■□□□ 1.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.31■■□□□ 1.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.3■■□□□ 1.32
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.26■■□□□ 1.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.13■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.11■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.11■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Mipep-204ENSMUST00000225043 1548 ntBASIC23.04■■□□□ 1.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm25262-201ENSMUST00000174934 133 ntBASIC23.04■■□□□ 1.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms