Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-49A0A0A6YWX2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-49A0A0A6YWX2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ighv1-49A0A0A6YWX2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-49A0A0A6YWX2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-49A0A0A6YWX2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ighv1-49A0A0A6YWX2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
Ighv1-49A0A0A6YWX2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-49A0A0A6YWX2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.23■□□□□ 0.67
Ighv1-49A0A0A6YWX2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-49A0A0A6YWX2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-49A0A0A6YWX2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.18■□□□□ 0.66
Ighv1-49A0A0A6YWX2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ighv1-49A0A0A6YWX2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-49A0A0A6YWX2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-49A0A0A6YWX2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.06■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.05■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ighv1-49A0A0A6YWX2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Rab21-202ENSMUST00000218831 843 ntBASIC18.99■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-49A0A0A6YWX2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-49A0A0A6YWX2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-49A0A0A6YWX2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.92■□□□□ 0.62
Ighv1-49A0A0A6YWX2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-49A0A0A6YWX2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ighv1-49A0A0A6YWX2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-49A0A0A6YWX2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.87■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.84■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-49A0A0A6YWX2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.79■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.78■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-49A0A0A6YWX2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-49A0A0A6YWX2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-49A0A0A6YWX2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-49A0A0A6YWX2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-49A0A0A6YWX2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-49A0A0A6YWX2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.64■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.62■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-49A0A0A6YWX2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-49A0A0A6YWX2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Gm25262-201ENSMUST00000174934 133 ntBASIC18.56■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-49A0A0A6YWX2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-49A0A0A6YWX2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-49A0A0A6YWX2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-49A0A0A6YWX2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-49A0A0A6YWX2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-49A0A0A6YWX2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-49A0A0A6YWX2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-49A0A0A6YWX2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.42■□□□□ 0.54
Ighv1-49A0A0A6YWX2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-49A0A0A6YWX2 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.4■□□□□ 0.54
Ighv1-49A0A0A6YWX2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ighv1-49A0A0A6YWX2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms