Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.14■□□□□ 0.97
Trav9d-1A0A075B699 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav9d-1A0A075B699 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.13■□□□□ 0.97
Trav9d-1A0A075B699 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav9d-1A0A075B699 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav9d-1A0A075B699 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav9d-1A0A075B699 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21■□□□□ 0.95
Trav9d-1A0A075B699 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav9d-1A0A075B699 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trav9d-1A0A075B699 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav9d-1A0A075B699 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav9d-1A0A075B699 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav9d-1A0A075B699 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Trav9d-1A0A075B699 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav9d-1A0A075B699 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav9d-1A0A075B699 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.79■□□□□ 0.92
Trav9d-1A0A075B699 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav9d-1A0A075B699 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.78■□□□□ 0.92
Trav9d-1A0A075B699 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav9d-1A0A075B699 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav9d-1A0A075B699 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav9d-1A0A075B699 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav9d-1A0A075B699 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.72■□□□□ 0.91
Trav9d-1A0A075B699 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav9d-1A0A075B699 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav9d-1A0A075B699 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav9d-1A0A075B699 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.68■□□□□ 0.9
Trav9d-1A0A075B699 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav9d-1A0A075B699 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trav9d-1A0A075B699 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trav9d-1A0A075B699 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav9d-1A0A075B699 Rab21-202ENSMUST00000218831 843 ntBASIC20.64■□□□□ 0.89
Trav9d-1A0A075B699 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav9d-1A0A075B699 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav9d-1A0A075B699 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav9d-1A0A075B699 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.62■□□□□ 0.89
Trav9d-1A0A075B699 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav9d-1A0A075B699 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trav9d-1A0A075B699 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav9d-1A0A075B699 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav9d-1A0A075B699 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav9d-1A0A075B699 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav9d-1A0A075B699 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav9d-1A0A075B699 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav9d-1A0A075B699 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.51■□□□□ 0.87
Trav9d-1A0A075B699 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.51■□□□□ 0.87
Trav9d-1A0A075B699 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav9d-1A0A075B699 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.48■□□□□ 0.87
Trav9d-1A0A075B699 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav9d-1A0A075B699 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav9d-1A0A075B699 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav9d-1A0A075B699 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav9d-1A0A075B699 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.44■□□□□ 0.86
Trav9d-1A0A075B699 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav9d-1A0A075B699 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav9d-1A0A075B699 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trav9d-1A0A075B699 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav9d-1A0A075B699 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav9d-1A0A075B699 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.39■□□□□ 0.85
Trav9d-1A0A075B699 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.39■□□□□ 0.85
Trav9d-1A0A075B699 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav9d-1A0A075B699 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav9d-1A0A075B699 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trav9d-1A0A075B699 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav9d-1A0A075B699 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav9d-1A0A075B699 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.36■□□□□ 0.85
Trav9d-1A0A075B699 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav9d-1A0A075B699 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav9d-1A0A075B699 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav9d-1A0A075B699 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav9d-1A0A075B699 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav9d-1A0A075B699 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav9d-1A0A075B699 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav9d-1A0A075B699 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav9d-1A0A075B699 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav9d-1A0A075B699 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.23■□□□□ 0.83
Trav9d-1A0A075B699 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trav9d-1A0A075B699 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav9d-1A0A075B699 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.21■□□□□ 0.83
Trav9d-1A0A075B699 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.18■□□□□ 0.82
Trav9d-1A0A075B699 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trav9d-1A0A075B699 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav9d-1A0A075B699 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav9d-1A0A075B699 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav9d-1A0A075B699 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.15■□□□□ 0.82
Trav9d-1A0A075B699 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav9d-1A0A075B699 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav9d-1A0A075B699 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav9d-1A0A075B699 Gm25262-201ENSMUST00000174934 133 ntBASIC20.12■□□□□ 0.81
Trav9d-1A0A075B699 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav9d-1A0A075B699 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav9d-1A0A075B699 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.09■□□□□ 0.81
Trav9d-1A0A075B699 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav9d-1A0A075B699 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav9d-1A0A075B699 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav9d-1A0A075B699 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav9d-1A0A075B699 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav9d-1A0A075B699 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trav9d-1A0A075B699 Mipep-204ENSMUST00000225043 1548 ntBASIC20.02■□□□□ 0.8
Trav9d-1A0A075B699 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms