Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav9d-3A0A075B695 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
Trav9d-3A0A075B695 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.45■□□□□ 0.7
Trav9d-3A0A075B695 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav9d-3A0A075B695 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav9d-3A0A075B695 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav9d-3A0A075B695 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav9d-3A0A075B695 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav9d-3A0A075B695 Rab21-202ENSMUST00000218831 843 ntBASIC19.35■□□□□ 0.69
Trav9d-3A0A075B695 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav9d-3A0A075B695 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav9d-3A0A075B695 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav9d-3A0A075B695 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9d-3A0A075B695 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav9d-3A0A075B695 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav9d-3A0A075B695 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav9d-3A0A075B695 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trav9d-3A0A075B695 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav9d-3A0A075B695 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trav9d-3A0A075B695 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav9d-3A0A075B695 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav9d-3A0A075B695 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.13■□□□□ 0.65
Trav9d-3A0A075B695 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav9d-3A0A075B695 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trav9d-3A0A075B695 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav9d-3A0A075B695 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.11■□□□□ 0.65
Trav9d-3A0A075B695 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav9d-3A0A075B695 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav9d-3A0A075B695 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav9d-3A0A075B695 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav9d-3A0A075B695 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav9d-3A0A075B695 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trav9d-3A0A075B695 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.05■□□□□ 0.64
Trav9d-3A0A075B695 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav9d-3A0A075B695 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-3A0A075B695 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav9d-3A0A075B695 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav9d-3A0A075B695 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav9d-3A0A075B695 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.01■□□□□ 0.63
Trav9d-3A0A075B695 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav9d-3A0A075B695 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9d-3A0A075B695 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9d-3A0A075B695 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav9d-3A0A075B695 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9d-3A0A075B695 Gm25262-201ENSMUST00000174934 133 ntBASIC19■□□□□ 0.63
Trav9d-3A0A075B695 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav9d-3A0A075B695 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav9d-3A0A075B695 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav9d-3A0A075B695 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav9d-3A0A075B695 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trav9d-3A0A075B695 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav9d-3A0A075B695 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9d-3A0A075B695 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav9d-3A0A075B695 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9d-3A0A075B695 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav9d-3A0A075B695 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9d-3A0A075B695 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav9d-3A0A075B695 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav9d-3A0A075B695 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9d-3A0A075B695 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9d-3A0A075B695 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav9d-3A0A075B695 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9d-3A0A075B695 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav9d-3A0A075B695 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav9d-3A0A075B695 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav9d-3A0A075B695 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.68■□□□□ 0.58
Trav9d-3A0A075B695 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav9d-3A0A075B695 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav9d-3A0A075B695 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav9d-3A0A075B695 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav9d-3A0A075B695 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9d-3A0A075B695 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9d-3A0A075B695 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9d-3A0A075B695 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav9d-3A0A075B695 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav9d-3A0A075B695 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.59■□□□□ 0.57
Trav9d-3A0A075B695 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav9d-3A0A075B695 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9d-3A0A075B695 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.57■□□□□ 0.56
Trav9d-3A0A075B695 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav9d-3A0A075B695 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.56■□□□□ 0.56
Trav9d-3A0A075B695 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav9d-3A0A075B695 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav9d-3A0A075B695 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-3A0A075B695 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-3A0A075B695 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav9d-3A0A075B695 Mipep-204ENSMUST00000225043 1548 ntBASIC18.53■□□□□ 0.56
Trav9d-3A0A075B695 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav9d-3A0A075B695 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav9d-3A0A075B695 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav9d-3A0A075B695 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav9d-3A0A075B695 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav9d-3A0A075B695 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.5■□□□□ 0.55
Trav9d-3A0A075B695 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9d-3A0A075B695 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9d-3A0A075B695 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9d-3A0A075B695 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.49■□□□□ 0.55
Trav9d-3A0A075B695 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav9d-3A0A075B695 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trav9d-3A0A075B695 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms