Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trav9n-4A0A075B631 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9n-4A0A075B631 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9n-4A0A075B631 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.58■□□□□ 0.57
Trav9n-4A0A075B631 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9n-4A0A075B631 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav9n-4A0A075B631 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav9n-4A0A075B631 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav9n-4A0A075B631 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav9n-4A0A075B631 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9n-4A0A075B631 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav9n-4A0A075B631 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav9n-4A0A075B631 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Trav9n-4A0A075B631 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav9n-4A0A075B631 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav9n-4A0A075B631 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav9n-4A0A075B631 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav9n-4A0A075B631 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav9n-4A0A075B631 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trav9n-4A0A075B631 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav9n-4A0A075B631 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav9n-4A0A075B631 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.3■□□□□ 0.52
Trav9n-4A0A075B631 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9n-4A0A075B631 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9n-4A0A075B631 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9n-4A0A075B631 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.27■□□□□ 0.52
Trav9n-4A0A075B631 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav9n-4A0A075B631 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav9n-4A0A075B631 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9n-4A0A075B631 Rab21-202ENSMUST00000218831 843 ntBASIC18.23■□□□□ 0.51
Trav9n-4A0A075B631 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.21■□□□□ 0.51
Trav9n-4A0A075B631 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9n-4A0A075B631 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9n-4A0A075B631 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9n-4A0A075B631 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.15■□□□□ 0.5
Trav9n-4A0A075B631 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9n-4A0A075B631 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9n-4A0A075B631 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9n-4A0A075B631 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav9n-4A0A075B631 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav9n-4A0A075B631 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9n-4A0A075B631 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav9n-4A0A075B631 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav9n-4A0A075B631 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9n-4A0A075B631 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9n-4A0A075B631 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav9n-4A0A075B631 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav9n-4A0A075B631 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav9n-4A0A075B631 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav9n-4A0A075B631 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9n-4A0A075B631 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9n-4A0A075B631 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav9n-4A0A075B631 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav9n-4A0A075B631 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav9n-4A0A075B631 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav9n-4A0A075B631 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18■□□□□ 0.47
Trav9n-4A0A075B631 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav9n-4A0A075B631 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trav9n-4A0A075B631 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav9n-4A0A075B631 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav9n-4A0A075B631 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav9n-4A0A075B631 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9n-4A0A075B631 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9n-4A0A075B631 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav9n-4A0A075B631 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav9n-4A0A075B631 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav9n-4A0A075B631 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9n-4A0A075B631 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav9n-4A0A075B631 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav9n-4A0A075B631 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9n-4A0A075B631 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav9n-4A0A075B631 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9n-4A0A075B631 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav9n-4A0A075B631 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9n-4A0A075B631 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9n-4A0A075B631 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav9n-4A0A075B631 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav9n-4A0A075B631 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.86■□□□□ 0.45
Trav9n-4A0A075B631 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9n-4A0A075B631 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav9n-4A0A075B631 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav9n-4A0A075B631 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9n-4A0A075B631 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.78■□□□□ 0.44
Trav9n-4A0A075B631 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav9n-4A0A075B631 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav9n-4A0A075B631 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav9n-4A0A075B631 Gm25262-201ENSMUST00000174934 133 ntBASIC17.75■□□□□ 0.43
Trav9n-4A0A075B631 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9n-4A0A075B631 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav9n-4A0A075B631 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav9n-4A0A075B631 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.73■□□□□ 0.43
Trav9n-4A0A075B631 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav9n-4A0A075B631 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9n-4A0A075B631 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9n-4A0A075B631 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav9n-4A0A075B631 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9n-4A0A075B631 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9n-4A0A075B631 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9n-4A0A075B631 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9n-4A0A075B631 Mipep-204ENSMUST00000225043 1548 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms