Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trav10nA0A075B622 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trav10nA0A075B622 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trav10nA0A075B622 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Trav10nA0A075B622 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trav10nA0A075B622 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.45■■□□□ 1.5
Trav10nA0A075B622 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trav10nA0A075B622 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.41■■□□□ 1.5
Trav10nA0A075B622 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav10nA0A075B622 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trav10nA0A075B622 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav10nA0A075B622 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav10nA0A075B622 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Trav10nA0A075B622 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trav10nA0A075B622 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Trav10nA0A075B622 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trav10nA0A075B622 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.21■■□□□ 1.47
Trav10nA0A075B622 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trav10nA0A075B622 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trav10nA0A075B622 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
Trav10nA0A075B622 Gm25262-201ENSMUST00000174934 133 ntBASIC24.18■■□□□ 1.46
Trav10nA0A075B622 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.17■■□□□ 1.46
Trav10nA0A075B622 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trav10nA0A075B622 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Trav10nA0A075B622 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Trav10nA0A075B622 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Trav10nA0A075B622 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trav10nA0A075B622 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav10nA0A075B622 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Trav10nA0A075B622 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Trav10nA0A075B622 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.05■■□□□ 1.44
Trav10nA0A075B622 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10nA0A075B622 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10nA0A075B622 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
Trav10nA0A075B622 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav10nA0A075B622 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.98■■□□□ 1.43
Trav10nA0A075B622 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trav10nA0A075B622 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trav10nA0A075B622 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trav10nA0A075B622 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav10nA0A075B622 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trav10nA0A075B622 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trav10nA0A075B622 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trav10nA0A075B622 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trav10nA0A075B622 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trav10nA0A075B622 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trav10nA0A075B622 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.76■■□□□ 1.39
Trav10nA0A075B622 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trav10nA0A075B622 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trav10nA0A075B622 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Trav10nA0A075B622 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Trav10nA0A075B622 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trav10nA0A075B622 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.68■■□□□ 1.38
Trav10nA0A075B622 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.68■■□□□ 1.38
Trav10nA0A075B622 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trav10nA0A075B622 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trav10nA0A075B622 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trav10nA0A075B622 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.63■■□□□ 1.37
Trav10nA0A075B622 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav10nA0A075B622 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trav10nA0A075B622 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.61■■□□□ 1.37
Trav10nA0A075B622 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Trav10nA0A075B622 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trav10nA0A075B622 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav10nA0A075B622 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav10nA0A075B622 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav10nA0A075B622 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav10nA0A075B622 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Trav10nA0A075B622 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav10nA0A075B622 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trav10nA0A075B622 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Trav10nA0A075B622 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.48■■□□□ 1.35
Trav10nA0A075B622 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trav10nA0A075B622 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Trav10nA0A075B622 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.45■■□□□ 1.34
Trav10nA0A075B622 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Trav10nA0A075B622 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trav10nA0A075B622 Gm27322-201ENSMUST00000184007 104 ntBASIC23.43■■□□□ 1.34
Trav10nA0A075B622 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.42■■□□□ 1.34
Trav10nA0A075B622 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trav10nA0A075B622 Gm26115-201ENSMUST00000175605 87 ntBASIC23.39■■□□□ 1.33
Trav10nA0A075B622 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav10nA0A075B622 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trav10nA0A075B622 Mipep-204ENSMUST00000225043 1548 ntBASIC23.38■■□□□ 1.33
Trav10nA0A075B622 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trav10nA0A075B622 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
Trav10nA0A075B622 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Trav10nA0A075B622 Gm8109-201ENSMUST00000194076 746 ntBASIC23.35■■□□□ 1.33
Trav10nA0A075B622 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10nA0A075B622 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10nA0A075B622 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trav10nA0A075B622 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trav10nA0A075B622 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10nA0A075B622 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10nA0A075B622 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav10nA0A075B622 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.3■■□□□ 1.32
Trav10nA0A075B622 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.29■■□□□ 1.32
Trav10nA0A075B622 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trav10nA0A075B622 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.27■■□□□ 1.32
Trav10nA0A075B622 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms