Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv1-55A0A075B5W6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.93■■□□□ 1.1
Ighv1-55A0A075B5W6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.9■■□□□ 1.1
Ighv1-55A0A075B5W6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-55A0A075B5W6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-55A0A075B5W6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-55A0A075B5W6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-55A0A075B5W6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ighv1-55A0A075B5W6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ighv1-55A0A075B5W6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv1-55A0A075B5W6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv1-55A0A075B5W6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ighv1-55A0A075B5W6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ighv1-55A0A075B5W6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.68■■□□□ 1.06
Ighv1-55A0A075B5W6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.68■■□□□ 1.06
Ighv1-55A0A075B5W6 Gm25262-201ENSMUST00000174934 133 ntBASIC21.68■■□□□ 1.06
Ighv1-55A0A075B5W6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.67■■□□□ 1.06
Ighv1-55A0A075B5W6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-55A0A075B5W6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-55A0A075B5W6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ighv1-55A0A075B5W6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-55A0A075B5W6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ighv1-55A0A075B5W6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-55A0A075B5W6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-55A0A075B5W6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-55A0A075B5W6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ighv1-55A0A075B5W6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ighv1-55A0A075B5W6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-55A0A075B5W6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-55A0A075B5W6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-55A0A075B5W6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-55A0A075B5W6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.54■■□□□ 1.04
Ighv1-55A0A075B5W6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv1-55A0A075B5W6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-55A0A075B5W6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-55A0A075B5W6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-55A0A075B5W6 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.47■■□□□ 1.03
Ighv1-55A0A075B5W6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-55A0A075B5W6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ighv1-55A0A075B5W6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-55A0A075B5W6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ighv1-55A0A075B5W6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.31■■□□□ 1
Ighv1-55A0A075B5W6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-55A0A075B5W6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.28■■□□□ 1
Ighv1-55A0A075B5W6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-55A0A075B5W6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.26■□□□□ 0.99
Ighv1-55A0A075B5W6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-55A0A075B5W6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-55A0A075B5W6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ighv1-55A0A075B5W6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-55A0A075B5W6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-55A0A075B5W6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-55A0A075B5W6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ighv1-55A0A075B5W6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.19■□□□□ 0.98
Ighv1-55A0A075B5W6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ighv1-55A0A075B5W6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-55A0A075B5W6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-55A0A075B5W6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ighv1-55A0A075B5W6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv1-55A0A075B5W6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv1-55A0A075B5W6 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.15■□□□□ 0.98
Ighv1-55A0A075B5W6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-55A0A075B5W6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-55A0A075B5W6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-55A0A075B5W6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-55A0A075B5W6 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.07■□□□□ 0.96
Ighv1-55A0A075B5W6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-55A0A075B5W6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-55A0A075B5W6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-55A0A075B5W6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ighv1-55A0A075B5W6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Ighv1-55A0A075B5W6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Ighv1-55A0A075B5W6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ighv1-55A0A075B5W6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-55A0A075B5W6 Gm27322-201ENSMUST00000184007 104 ntBASIC21.01■□□□□ 0.95
Ighv1-55A0A075B5W6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.01■□□□□ 0.95
Ighv1-55A0A075B5W6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-55A0A075B5W6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-55A0A075B5W6 Gm26115-201ENSMUST00000175605 87 ntBASIC20.97■□□□□ 0.95
Ighv1-55A0A075B5W6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.96■□□□□ 0.95
Ighv1-55A0A075B5W6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-55A0A075B5W6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Ighv1-55A0A075B5W6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-55A0A075B5W6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-55A0A075B5W6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.94■□□□□ 0.94
Ighv1-55A0A075B5W6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-55A0A075B5W6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-55A0A075B5W6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.9■□□□□ 0.94
Ighv1-55A0A075B5W6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-55A0A075B5W6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-55A0A075B5W6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-55A0A075B5W6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.88■□□□□ 0.93
Ighv1-55A0A075B5W6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ighv1-55A0A075B5W6 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.85■□□□□ 0.93
Ighv1-55A0A075B5W6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ighv1-55A0A075B5W6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.83■□□□□ 0.93
Ighv1-55A0A075B5W6 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.82■□□□□ 0.92
Ighv1-55A0A075B5W6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-55A0A075B5W6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ighv1-55A0A075B5W6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms