Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Upk1bQ9Z2C6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Upk1bQ9Z2C6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk1bQ9Z2C6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk1bQ9Z2C6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk1bQ9Z2C6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk1bQ9Z2C6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.68■□□□□ 0.74
Upk1bQ9Z2C6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Upk1bQ9Z2C6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Upk1bQ9Z2C6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Upk1bQ9Z2C6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Upk1bQ9Z2C6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1bQ9Z2C6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.66■□□□□ 0.74
Upk1bQ9Z2C6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Upk1bQ9Z2C6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Upk1bQ9Z2C6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.64■□□□□ 0.74
Upk1bQ9Z2C6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Upk1bQ9Z2C6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Upk1bQ9Z2C6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Upk1bQ9Z2C6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1bQ9Z2C6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Upk1bQ9Z2C6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Upk1bQ9Z2C6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms