Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh17Q9R100 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.81■□□□□ 0.92
Cdh17Q9R100 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh17Q9R100 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdh17Q9R100 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.8■□□□□ 0.92
Cdh17Q9R100 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Cdh17Q9R100 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Cdh17Q9R100 Gm27502-201ENSMUST00000183495 199 ntBASIC20.79■□□□□ 0.92
Cdh17Q9R100 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh17Q9R100 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh17Q9R100 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh17Q9R100 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cdh17Q9R100 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh17Q9R100 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh17Q9R100 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh17Q9R100 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cdh17Q9R100 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh17Q9R100 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Gm11175-201ENSMUST00000116172 543 ntBASIC20.75■□□□□ 0.91
Cdh17Q9R100 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh17Q9R100 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.75■□□□□ 0.91
Cdh17Q9R100 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Gm14523-201ENSMUST00000117260 558 ntBASIC20.74■□□□□ 0.91
Cdh17Q9R100 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh17Q9R100 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh17Q9R100 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Cdh17Q9R100 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdh17Q9R100 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh17Q9R100 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh17Q9R100 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.72■□□□□ 0.91
Cdh17Q9R100 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdh17Q9R100 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh17Q9R100 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.71■□□□□ 0.91
Cdh17Q9R100 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh17Q9R100 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh17Q9R100 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh17Q9R100 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh17Q9R100 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh17Q9R100 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Gm7332-201ENSMUST00000118351 454 ntBASIC20.68■□□□□ 0.9
Cdh17Q9R100 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh17Q9R100 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms