Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chrna6Q9R0W9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna6Q9R0W9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna6Q9R0W9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna6Q9R0W9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna6Q9R0W9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chrna6Q9R0W9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna6Q9R0W9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chrna6Q9R0W9 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Chrna6Q9R0W9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chrna6Q9R0W9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chrna6Q9R0W9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.64■■□□□ 1.05
Chrna6Q9R0W9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna6Q9R0W9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chrna6Q9R0W9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.63■■□□□ 1.05
Chrna6Q9R0W9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.62■■□□□ 1.05
Chrna6Q9R0W9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna6Q9R0W9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Chrna6Q9R0W9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chrna6Q9R0W9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Chrna6Q9R0W9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Chrna6Q9R0W9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chrna6Q9R0W9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna6Q9R0W9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chrna6Q9R0W9 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.58■■□□□ 1.05
Chrna6Q9R0W9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.58■■□□□ 1.04
Chrna6Q9R0W9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Chrna6Q9R0W9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.58■■□□□ 1.04
Chrna6Q9R0W9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna6Q9R0W9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna6Q9R0W9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna6Q9R0W9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna6Q9R0W9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chrna6Q9R0W9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chrna6Q9R0W9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.55■■□□□ 1.04
Chrna6Q9R0W9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chrna6Q9R0W9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms