Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssmem1Q9D9Y8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ssmem1Q9D9Y8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ssmem1Q9D9Y8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssmem1Q9D9Y8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssmem1Q9D9Y8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ssmem1Q9D9Y8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssmem1Q9D9Y8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssmem1Q9D9Y8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ssmem1Q9D9Y8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssmem1Q9D9Y8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssmem1Q9D9Y8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssmem1Q9D9Y8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssmem1Q9D9Y8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssmem1Q9D9Y8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssmem1Q9D9Y8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Ssmem1Q9D9Y8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssmem1Q9D9Y8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssmem1Q9D9Y8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssmem1Q9D9Y8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssmem1Q9D9Y8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssmem1Q9D9Y8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssmem1Q9D9Y8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssmem1Q9D9Y8 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.33■□□□□ 0.53
Ssmem1Q9D9Y8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssmem1Q9D9Y8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssmem1Q9D9Y8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ssmem1Q9D9Y8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssmem1Q9D9Y8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssmem1Q9D9Y8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssmem1Q9D9Y8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssmem1Q9D9Y8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Ssmem1Q9D9Y8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssmem1Q9D9Y8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.3■□□□□ 0.52
Ssmem1Q9D9Y8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms