Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdca3Q99M54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.66■□□□□ 0.74
Cdca3Q99M54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdca3Q99M54 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdca3Q99M54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Cdca3Q99M54 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdca3Q99M54 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.65■□□□□ 0.74
Cdca3Q99M54 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdca3Q99M54 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cdca3Q99M54 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Cdca3Q99M54 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdca3Q99M54 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdca3Q99M54 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdca3Q99M54 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.63■□□□□ 0.73
Cdca3Q99M54 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.63■□□□□ 0.73
Cdca3Q99M54 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdca3Q99M54 Etf1-202ENSMUST00000180351 108 ntBASIC19.61■□□□□ 0.73
Cdca3Q99M54 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdca3Q99M54 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdca3Q99M54 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.6■□□□□ 0.73
Cdca3Q99M54 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Cdca3Q99M54 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.6■□□□□ 0.73
Cdca3Q99M54 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdca3Q99M54 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Cdca3Q99M54 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Cdca3Q99M54 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdca3Q99M54 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.58■□□□□ 0.72
Cdca3Q99M54 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdca3Q99M54 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdca3Q99M54 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdca3Q99M54 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdca3Q99M54 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdca3Q99M54 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdca3Q99M54 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Gm10232-201ENSMUST00000089221 720 ntBASIC19.54■□□□□ 0.72
Cdca3Q99M54 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.54■□□□□ 0.72
Cdca3Q99M54 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdca3Q99M54 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdca3Q99M54 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdca3Q99M54 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdca3Q99M54 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdca3Q99M54 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms