Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha3Q91Y16 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha3Q91Y16 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha3Q91Y16 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdha3Q91Y16 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.3■■□□□ 1.16
Pcdha3Q91Y16 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdha3Q91Y16 Gm43566-201ENSMUST00000196851 808 ntBASIC22.3■■□□□ 1.16
Pcdha3Q91Y16 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdha3Q91Y16 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdha3Q91Y16 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdha3Q91Y16 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha3Q91Y16 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha3Q91Y16 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Pcdha3Q91Y16 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdha3Q91Y16 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pcdha3Q91Y16 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdha3Q91Y16 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha3Q91Y16 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha3Q91Y16 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdha3Q91Y16 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdha3Q91Y16 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdha3Q91Y16 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdha3Q91Y16 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha3Q91Y16 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdha3Q91Y16 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha3Q91Y16 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdha3Q91Y16 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdha3Q91Y16 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdha3Q91Y16 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdha3Q91Y16 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Pcdha3Q91Y16 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha3Q91Y16 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha3Q91Y16 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdha3Q91Y16 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Gm5812-201ENSMUST00000061073 957 ntBASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.19■■□□□ 1.14
Pcdha3Q91Y16 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
Pcdha3Q91Y16 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdha3Q91Y16 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.18■■□□□ 1.14
Pcdha3Q91Y16 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Gm13238-201ENSMUST00000117655 780 ntBASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdha3Q91Y16 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdha3Q91Y16 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Pcdha3Q91Y16 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms