Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb5Q91XZ5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.34■■□□□ 1.65
Pcdhb5Q91XZ5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb5Q91XZ5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb5Q91XZ5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb5Q91XZ5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb5Q91XZ5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
Pcdhb5Q91XZ5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb5Q91XZ5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.32■■□□□ 1.64
Pcdhb5Q91XZ5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb5Q91XZ5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb5Q91XZ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb5Q91XZ5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb5Q91XZ5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb5Q91XZ5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb5Q91XZ5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Pcdhb5Q91XZ5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb5Q91XZ5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb5Q91XZ5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
Pcdhb5Q91XZ5 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.27■■□□□ 1.64
Pcdhb5Q91XZ5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Pcdhb5Q91XZ5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb5Q91XZ5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb5Q91XZ5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC25.26■■□□□ 1.63
Pcdhb5Q91XZ5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhb5Q91XZ5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb5Q91XZ5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb5Q91XZ5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb5Q91XZ5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pcdhb5Q91XZ5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb5Q91XZ5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb5Q91XZ5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb5Q91XZ5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.22■■□□□ 1.63
Pcdhb5Q91XZ5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb5Q91XZ5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb5Q91XZ5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb5Q91XZ5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb5Q91XZ5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb5Q91XZ5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhb5Q91XZ5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.2■■□□□ 1.62
Pcdhb5Q91XZ5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.2■■□□□ 1.62
Pcdhb5Q91XZ5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC25.2■■□□□ 1.62
Pcdhb5Q91XZ5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Golgb1-201ENSMUST00000023534 498 ntBASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb5Q91XZ5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb5Q91XZ5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms