Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 AC112142.1-201ENSMUST00000228796 918 ntBASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx54Q8K4L0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC28.54■■■□□ 2.16
Ddx54Q8K4L0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ddx54Q8K4L0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ddx54Q8K4L0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC28.53■■■□□ 2.16
Ddx54Q8K4L0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.51■■■□□ 2.16
Ddx54Q8K4L0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ddx54Q8K4L0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ddx54Q8K4L0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ddx54Q8K4L0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx54Q8K4L0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx54Q8K4L0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx54Q8K4L0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Ddx54Q8K4L0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC28.48■■■□□ 2.15
Ddx54Q8K4L0 Gm7291-201ENSMUST00000199147 382 ntBASIC28.48■■■□□ 2.15
Ddx54Q8K4L0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ddx54Q8K4L0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ddx54Q8K4L0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx54Q8K4L0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Ddx54Q8K4L0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx54Q8K4L0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx54Q8K4L0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC28.45■■■□□ 2.15
Ddx54Q8K4L0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Ddx54Q8K4L0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Ddx54Q8K4L0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC28.45■■■□□ 2.14
Ddx54Q8K4L0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ddx54Q8K4L0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ddx54Q8K4L0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ddx54Q8K4L0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx54Q8K4L0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC28.43■■■□□ 2.14
Ddx54Q8K4L0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC28.43■■■□□ 2.14
Ddx54Q8K4L0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx54Q8K4L0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx54Q8K4L0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx54Q8K4L0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ddx54Q8K4L0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Ddx54Q8K4L0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx54Q8K4L0 Gm8493-201ENSMUST00000196881 489 ntBASIC28.4■■■□□ 2.14
Ddx54Q8K4L0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx54Q8K4L0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx54Q8K4L0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ddx54Q8K4L0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ddx54Q8K4L0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ddx54Q8K4L0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
Ddx54Q8K4L0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx54Q8K4L0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx54Q8K4L0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC28.38■■■□□ 2.13
Ddx54Q8K4L0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx54Q8K4L0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx54Q8K4L0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ddx54Q8K4L0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
Ddx54Q8K4L0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC28.37■■■□□ 2.13
Ddx54Q8K4L0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ddx54Q8K4L0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx54Q8K4L0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx54Q8K4L0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx54Q8K4L0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms