Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sox30Q8CGW4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sox30Q8CGW4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sox30Q8CGW4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Sox30Q8CGW4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.51■■□□□ 1.35
Sox30Q8CGW4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sox30Q8CGW4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox30Q8CGW4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.5■■□□□ 1.35
Sox30Q8CGW4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sox30Q8CGW4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sox30Q8CGW4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sox30Q8CGW4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sox30Q8CGW4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Sox30Q8CGW4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Sox30Q8CGW4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Sox30Q8CGW4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sox30Q8CGW4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sox30Q8CGW4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sox30Q8CGW4 Gm6311-201ENSMUST00000073790 878 ntBASIC23.46■■□□□ 1.35
Sox30Q8CGW4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sox30Q8CGW4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Sox30Q8CGW4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Notumos-201ENSMUST00000151998 2659 ntBASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sox30Q8CGW4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sox30Q8CGW4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sox30Q8CGW4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sox30Q8CGW4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sox30Q8CGW4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sox30Q8CGW4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sox30Q8CGW4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.4■■□□□ 1.34
Sox30Q8CGW4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sox30Q8CGW4 Gm9806-201ENSMUST00000051080 552 ntBASIC23.39■■□□□ 1.33
Sox30Q8CGW4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sox30Q8CGW4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Sox30Q8CGW4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Sox30Q8CGW4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Sox30Q8CGW4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sox30Q8CGW4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.37■■□□□ 1.33
Sox30Q8CGW4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sox30Q8CGW4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Scarna2-201ENSMUST00000157560 414 ntBASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sox30Q8CGW4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms