Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Gm37136-201ENSMUST00000194368 194 ntBASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Gm7432-201ENSMUST00000210343 879 ntBASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms