Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp28Q8CGV8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp28Q8CGV8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp28Q8CGV8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mmp28Q8CGV8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mmp28Q8CGV8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp28Q8CGV8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mmp28Q8CGV8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.03■□□□□ 0.48
Mmp28Q8CGV8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Gm37136-201ENSMUST00000194368 194 ntBASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp28Q8CGV8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp28Q8CGV8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp28Q8CGV8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp28Q8CGV8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Gm7432-201ENSMUST00000210343 879 ntBASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp28Q8CGV8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp28Q8CGV8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mmp28Q8CGV8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms