Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lysmd4Q8CC84 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lysmd4Q8CC84 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd4Q8CC84 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd4Q8CC84 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd4Q8CC84 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd4Q8CC84 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd4Q8CC84 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd4Q8CC84 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd4Q8CC84 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd4Q8CC84 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd4Q8CC84 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd4Q8CC84 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd4Q8CC84 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Lysmd4Q8CC84 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lysmd4Q8CC84 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.08■□□□□ 0.64
Lysmd4Q8CC84 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lysmd4Q8CC84 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lysmd4Q8CC84 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lysmd4Q8CC84 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lysmd4Q8CC84 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lysmd4Q8CC84 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lysmd4Q8CC84 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lysmd4Q8CC84 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Gm44428-201ENSMUST00000204474 874 ntBASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd4Q8CC84 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd4Q8CC84 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd4Q8CC84 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd4Q8CC84 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd4Q8CC84 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd4Q8CC84 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lysmd4Q8CC84 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd4Q8CC84 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms