Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sh3rf2Q8BZT2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.72■■□□□ 1.07
Sh3rf2Q8BZT2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.72■■□□□ 1.07
Sh3rf2Q8BZT2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf2Q8BZT2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf2Q8BZT2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sh3rf2Q8BZT2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.71■■□□□ 1.07
Sh3rf2Q8BZT2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf2Q8BZT2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Sh3rf2Q8BZT2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sh3rf2Q8BZT2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf2Q8BZT2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf2Q8BZT2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.7■■□□□ 1.06
Sh3rf2Q8BZT2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf2Q8BZT2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sh3rf2Q8BZT2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf2Q8BZT2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.69■■□□□ 1.06
Sh3rf2Q8BZT2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf2Q8BZT2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf2Q8BZT2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sh3rf2Q8BZT2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sh3rf2Q8BZT2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Sh3rf2Q8BZT2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf2Q8BZT2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf2Q8BZT2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf2Q8BZT2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sh3rf2Q8BZT2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh3rf2Q8BZT2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sh3rf2Q8BZT2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf2Q8BZT2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3rf2Q8BZT2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3rf2Q8BZT2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3rf2Q8BZT2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf2Q8BZT2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf2Q8BZT2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.62■■□□□ 1.05
Sh3rf2Q8BZT2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3rf2Q8BZT2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3rf2Q8BZT2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3rf2Q8BZT2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf2Q8BZT2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sh3rf2Q8BZT2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3rf2Q8BZT2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.59■■□□□ 1.05
Sh3rf2Q8BZT2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Sh3rf2Q8BZT2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3rf2Q8BZT2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.58■■□□□ 1.04
Sh3rf2Q8BZT2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms