Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdk5rap1Q8BTW8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdk5rap1Q8BTW8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdk5rap1Q8BTW8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdk5rap1Q8BTW8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdk5rap1Q8BTW8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap1Q8BTW8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap1Q8BTW8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap1Q8BTW8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cdk5rap1Q8BTW8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap1Q8BTW8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap1Q8BTW8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cdk5rap1Q8BTW8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap1Q8BTW8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap1Q8BTW8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap1Q8BTW8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap1Q8BTW8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap1Q8BTW8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap1Q8BTW8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap1Q8BTW8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap1Q8BTW8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap1Q8BTW8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap1Q8BTW8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdk5rap1Q8BTW8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms