Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.58■□□□□ 0.89
Cpsf4Q8BQZ5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf4Q8BQZ5 Gm22567-201ENSMUST00000175542 342 ntBASIC20.58■□□□□ 0.89
Cpsf4Q8BQZ5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf4Q8BQZ5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.58■□□□□ 0.88
Cpsf4Q8BQZ5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf4Q8BQZ5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf4Q8BQZ5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf4Q8BQZ5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cpsf4Q8BQZ5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf4Q8BQZ5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpsf4Q8BQZ5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf4Q8BQZ5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf4Q8BQZ5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf4Q8BQZ5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf4Q8BQZ5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf4Q8BQZ5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Gm5921-201ENSMUST00000075898 882 ntBASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf4Q8BQZ5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf4Q8BQZ5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf4Q8BQZ5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf4Q8BQZ5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf4Q8BQZ5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpsf4Q8BQZ5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpsf4Q8BQZ5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf4Q8BQZ5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf4Q8BQZ5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.47■□□□□ 0.87
Cpsf4Q8BQZ5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpsf4Q8BQZ5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cpsf4Q8BQZ5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.46■□□□□ 0.87
Cpsf4Q8BQZ5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms