Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp1Q8BJ37 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Golgb1-201ENSMUST00000023534 498 ntBASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Tdp1Q8BJ37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Tdp1Q8BJ37 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Gm27454-201ENSMUST00000185090 204 ntBASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Gm12821-201ENSMUST00000120022 600 ntBASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tdp1Q8BJ37 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tdp1Q8BJ37 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms