Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Tdp1Q8BJ37 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Tdp1Q8BJ37 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tdp1Q8BJ37 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tdp1Q8BJ37 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tdp1Q8BJ37 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tdp1Q8BJ37 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.74■■□□□ 1.39
Tdp1Q8BJ37 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tdp1Q8BJ37 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Tdp1Q8BJ37 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Golgb1-201ENSMUST00000023534 498 ntBASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tdp1Q8BJ37 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Tdp1Q8BJ37 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Tdp1Q8BJ37 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tdp1Q8BJ37 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Gm27454-201ENSMUST00000185090 204 ntBASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tdp1Q8BJ37 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Gm12821-201ENSMUST00000120022 600 ntBASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tdp1Q8BJ37 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tdp1Q8BJ37 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Tdp1Q8BJ37 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tdp1Q8BJ37 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tdp1Q8BJ37 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tdp1Q8BJ37 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms