Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Smndc1Q8BGT7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smndc1Q8BGT7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Smndc1Q8BGT7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Smndc1Q8BGT7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smndc1Q8BGT7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Smndc1Q8BGT7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smndc1Q8BGT7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smndc1Q8BGT7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smndc1Q8BGT7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smndc1Q8BGT7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smndc1Q8BGT7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smndc1Q8BGT7 Gm11687-201ENSMUST00000118911 886 ntBASIC20.41■□□□□ 0.86
Smndc1Q8BGT7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smndc1Q8BGT7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smndc1Q8BGT7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.4■□□□□ 0.86
Smndc1Q8BGT7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smndc1Q8BGT7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smndc1Q8BGT7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smndc1Q8BGT7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smndc1Q8BGT7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smndc1Q8BGT7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.39■□□□□ 0.86
Smndc1Q8BGT7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smndc1Q8BGT7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smndc1Q8BGT7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smndc1Q8BGT7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.39■□□□□ 0.85
Smndc1Q8BGT7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.39■□□□□ 0.85
Smndc1Q8BGT7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smndc1Q8BGT7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Gm45364-201ENSMUST00000210883 159 ntBASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smndc1Q8BGT7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smndc1Q8BGT7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smndc1Q8BGT7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smndc1Q8BGT7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smndc1Q8BGT7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smndc1Q8BGT7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smndc1Q8BGT7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smndc1Q8BGT7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smndc1Q8BGT7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.33■□□□□ 0.85
Smndc1Q8BGT7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smndc1Q8BGT7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smndc1Q8BGT7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smndc1Q8BGT7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.33■□□□□ 0.85
Smndc1Q8BGT7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smndc1Q8BGT7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smndc1Q8BGT7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms