Protein–RNA interactions for Protein: Q80ZV0

Rnaseh2b, Ribonuclease H2 subunit B, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2bQ80ZV0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnaseh2bQ80ZV0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Gm16437-201ENSMUST00000025669 507 ntBASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
Rnaseh2bQ80ZV0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnaseh2bQ80ZV0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rnaseh2bQ80ZV0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnaseh2bQ80ZV0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnaseh2bQ80ZV0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnaseh2bQ80ZV0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnaseh2bQ80ZV0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnaseh2bQ80ZV0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnaseh2bQ80ZV0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnaseh2bQ80ZV0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnaseh2bQ80ZV0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnaseh2bQ80ZV0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnaseh2bQ80ZV0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnaseh2bQ80ZV0 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnaseh2bQ80ZV0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnaseh2bQ80ZV0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rnaseh2bQ80ZV0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnaseh2bQ80ZV0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnaseh2bQ80ZV0 Gm11687-201ENSMUST00000118911 886 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms